Chris Oswald commited on
Commit
0f058a2
·
1 Parent(s): fbb72cc
Files changed (1) hide show
  1. SPIDER.py +4 -4
SPIDER.py CHANGED
@@ -489,7 +489,7 @@ class SPIDER(datasets.GeneratorBasedBuilder):
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  )
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  # Create PIL image object of original image
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- PIL_original_image = PIL.Image.fromarray(image_array_original)
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  # Load .mha mask file
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  mask_path = os.path.join(paths_dict['masks'], 'masks', example)
@@ -505,7 +505,7 @@ class SPIDER(datasets.GeneratorBasedBuilder):
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  )
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  # Create PIL image object of original mask
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- PIL_original_mask = PIL.Image.fromarray(mask_array_original)
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  # Extract overview data corresponding to image
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  image_overview = overview_dict[scan_id]
@@ -517,8 +517,8 @@ class SPIDER(datasets.GeneratorBasedBuilder):
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  return_dict = {
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  'patient_id':patient_id,
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  'scan_type':scan_type,
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- 'raw_image':PIL_original_image,
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- 'raw_mask':PIL_original_mask,
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  'image_array':image_array_standardized,
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  'mask_array':mask_array_standardized,
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  'metadata':image_overview,
 
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  )
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  # Create PIL image object of original image
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+ # PIL_original_image = PIL.Image.fromarray(image_array_original)
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  # Load .mha mask file
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  mask_path = os.path.join(paths_dict['masks'], 'masks', example)
 
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  )
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  # Create PIL image object of original mask
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+ # PIL_original_mask = PIL.Image.fromarray(mask_array_original)
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  # Extract overview data corresponding to image
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  image_overview = overview_dict[scan_id]
 
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  return_dict = {
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  'patient_id':patient_id,
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  'scan_type':scan_type,
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+ 'raw_image':image_array_original,
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+ 'raw_mask':mask_array_original,
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  'image_array':image_array_standardized,
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  'mask_array':mask_array_standardized,
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  'metadata':image_overview,