Chris Oswald
commited on
Commit
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0f058a2
1
Parent(s):
fbb72cc
debugging
Browse files
SPIDER.py
CHANGED
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@@ -489,7 +489,7 @@ class SPIDER(datasets.GeneratorBasedBuilder):
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# Create PIL image object of original image
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PIL_original_image = PIL.Image.fromarray(image_array_original)
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# Load .mha mask file
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mask_path = os.path.join(paths_dict['masks'], 'masks', example)
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@@ -505,7 +505,7 @@ class SPIDER(datasets.GeneratorBasedBuilder):
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# Create PIL image object of original mask
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PIL_original_mask = PIL.Image.fromarray(mask_array_original)
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# Extract overview data corresponding to image
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image_overview = overview_dict[scan_id]
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@@ -517,8 +517,8 @@ class SPIDER(datasets.GeneratorBasedBuilder):
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return_dict = {
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'patient_id':patient_id,
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'scan_type':scan_type,
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'raw_image':
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'raw_mask':
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'image_array':image_array_standardized,
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'mask_array':mask_array_standardized,
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'metadata':image_overview,
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)
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# Create PIL image object of original image
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# PIL_original_image = PIL.Image.fromarray(image_array_original)
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# Load .mha mask file
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mask_path = os.path.join(paths_dict['masks'], 'masks', example)
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)
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# Create PIL image object of original mask
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# PIL_original_mask = PIL.Image.fromarray(mask_array_original)
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# Extract overview data corresponding to image
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image_overview = overview_dict[scan_id]
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return_dict = {
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'patient_id':patient_id,
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'scan_type':scan_type,
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'raw_image':image_array_original,
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'raw_mask':mask_array_original,
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'image_array':image_array_standardized,
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'mask_array':mask_array_standardized,
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'metadata':image_overview,
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