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- segmentation
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#
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The SPIDER dataset contains (human) lumbar spine magnetic resonance images (MRI) and segmentation masks described in the following paper:
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<figcaption>Example MRI scan with segmentation masks</figcaption>
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</figure>
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## Getting Started
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First, you will need to install the following dependencies:
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More detailed examples for [loading](tutorials/load_data.ipynb) the dataset with different configurations
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and using the dataset for [segmentation tasks](tutorials/segment_anything.ipynb) are provided in the [tutorials](tutorials) folder.
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## Table of Contents
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(Placeholder--to be filled in at end of project)
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## Dataset Description
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- **Paper:** [Lumbar spine segmentation in MR images: a dataset and a public benchmark](https://www.nature.com/articles/s41597-024-03090-w)
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patient characteristics (biological sex and age, when available), and radiological gradings indicating specific degenerative
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changes can be loaded with the corresponding image data.
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### Modifications
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This version of the SPIDER dataset (i.e., available through the HuggingFace `datasets` library) differs from the original
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data available on [Zenodo](https://zenodo.org/records/8009680) in two key ways:
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- segmentation
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---
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# Spine Segmentation: Discs, Vertebrae and Spinal Canal (SPIDER)
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The SPIDER dataset contains (human) lumbar spine magnetic resonance images (MRI) and segmentation masks described in the following paper:
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<figcaption>Example MRI scan with segmentation masks</figcaption>
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</figure>
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## Table of Contents
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1. [Getting Started](https://huggingface.co/datasets/cdoswald/SPIDER#getting-started)
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2. [Dataset Description]()
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a. [Dataset Summary](https://huggingface.co/datasets/cdoswald/SPIDER#dataset-summary)
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b. [Data Modifications]()
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3. [Dataset Structure]()
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a. [Data Instances]()
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b. [Data Format/Fields]()
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c. [Data Splits]()
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4. [Image Resolution]()
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5. [Additional Information]()
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a. [License]()
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b. [Citation]()
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c. [Disclaimer]()
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## Getting Started
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First, you will need to install the following dependencies:
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More detailed examples for [loading](tutorials/load_data.ipynb) the dataset with different configurations
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and using the dataset for [segmentation tasks](tutorials/segment_anything.ipynb) are provided in the [tutorials](tutorials) folder.
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## Dataset Description
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- **Paper:** [Lumbar spine segmentation in MR images: a dataset and a public benchmark](https://www.nature.com/articles/s41597-024-03090-w)
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patient characteristics (biological sex and age, when available), and radiological gradings indicating specific degenerative
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changes can be loaded with the corresponding image data.
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### Data Modifications
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This version of the SPIDER dataset (i.e., available through the HuggingFace `datasets` library) differs from the original
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data available on [Zenodo](https://zenodo.org/records/8009680) in two key ways:
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