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README.md
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tags:
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- single-cell
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- biology
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---
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# scGPT
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scGPT is A foundation model for single-cell biology based on a generative pre trained transformer across a repository of over 33 million cells.
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attention_mask=mask)
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```
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# TDC Citation
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```
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@inproceedings{
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}
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```
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# Additional Citations
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-
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- Cui, H., Wang, C., Maan, H. et al. scGPT: toward building a foundation model for single-cell multi-omics using generative AI. Nat Methods 21, 1470–1480 (2024). https://doi.org/10.1038/s41592-024-02201-0
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# Model Homepage
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https://huggingface.co/MohamedMabrouk/scGPT
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# Model Github
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https://github.com/bowang-lab/scGPT
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tags:
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- single-cell
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- biology
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base_model:
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- MohamedMabrouk/scGPT
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---
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# scGPT
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scGPT is A foundation model for single-cell biology based on a generative pre trained transformer across a repository of over 33 million cells.
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attention_mask=mask)
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```
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# TDC.scGPT Source Code
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https://github.com/mims-harvard/TDC/blob/main/tdc/model_server/models/scgpt.py
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* hf migration code available upon request
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* weights extracted from base model
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# TDC Citation
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```
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@inproceedings{
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}
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```
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# Additional Citations
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- Cui, H., Wang, C., Maan, H. et al. scGPT: toward building a foundation model for single-cell multi-omics using generative AI. Nat Methods 21, 1470–1480 (2024). https://doi.org/10.1038/s41592-024-02201-0
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# Model Github
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https://github.com/bowang-lab/scGPT
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