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SubscribeQuestion Generation for Reading Comprehension Assessment by Modeling How and What to Ask
Reading is integral to everyday life, and yet learning to read is a struggle for many young learners. During lessons, teachers can use comprehension questions to increase engagement, test reading skills, and improve retention. Historically such questions were written by skilled teachers, but recently language models have been used to generate comprehension questions. However, many existing Question Generation (QG) systems focus on generating literal questions from the text, and have no way to control the type of the generated question. In this paper, we study QG for reading comprehension where inferential questions are critical and extractive techniques cannot be used. We propose a two-step model (HTA-WTA) that takes advantage of previous datasets, and can generate questions for a specific targeted comprehension skill. We propose a new reading comprehension dataset that contains questions annotated with story-based reading comprehension skills (SBRCS), allowing for a more complete reader assessment. Across several experiments, our results show that HTA-WTA outperforms multiple strong baselines on this new dataset. We show that the HTA-WTA model tests for strong SCRS by asking deep inferential questions.
Effective Noise-aware Data Simulation for Domain-adaptive Speech Enhancement Leveraging Dynamic Stochastic Perturbation
Cross-domain speech enhancement (SE) is often faced with severe challenges due to the scarcity of noise and background information in an unseen target domain, leading to a mismatch between training and test conditions. This study puts forward a novel data simulation method to address this issue, leveraging noise-extractive techniques and generative adversarial networks (GANs) with only limited target noisy speech data. Notably, our method employs a noise encoder to extract noise embeddings from target-domain data. These embeddings aptly guide the generator to synthesize utterances acoustically fitted to the target domain while authentically preserving the phonetic content of the input clean speech. Furthermore, we introduce the notion of dynamic stochastic perturbation, which can inject controlled perturbations into the noise embeddings during inference, thereby enabling the model to generalize well to unseen noise conditions. Experiments on the VoiceBank-DEMAND benchmark dataset demonstrate that our domain-adaptive SE method outperforms an existing strong baseline based on data simulation.
San-BERT: Extractive Summarization for Sanskrit Documents using BERT and it's variants
In this work, we develop language models for the Sanskrit language, namely Bidirectional Encoder Representations from Transformers (BERT) and its variants: A Lite BERT (ALBERT), and Robustly Optimized BERT (RoBERTa) using Devanagari Sanskrit text corpus. Then we extracted the features for the given text from these models. We applied the dimensional reduction and clustering techniques on the features to generate an extractive summary for a given Sanskrit document. Along with the extractive text summarization techniques, we have also created and released a Sanskrit Devanagari text corpus publicly.
BERT-VBD: Vietnamese Multi-Document Summarization Framework
In tackling the challenge of Multi-Document Summarization (MDS), numerous methods have been proposed, spanning both extractive and abstractive summarization techniques. However, each approach has its own limitations, making it less effective to rely solely on either one. An emerging and promising strategy involves a synergistic fusion of extractive and abstractive summarization methods. Despite the plethora of studies in this domain, research on the combined methodology remains scarce, particularly in the context of Vietnamese language processing. This paper presents a novel Vietnamese MDS framework leveraging a two-component pipeline architecture that integrates extractive and abstractive techniques. The first component employs an extractive approach to identify key sentences within each document. This is achieved by a modification of the pre-trained BERT network, which derives semantically meaningful phrase embeddings using siamese and triplet network structures. The second component utilizes the VBD-LLaMA2-7B-50b model for abstractive summarization, ultimately generating the final summary document. Our proposed framework demonstrates a positive performance, attaining ROUGE-2 scores of 39.6% on the VN-MDS dataset and outperforming the state-of-the-art baselines.
Scaling Up Summarization: Leveraging Large Language Models for Long Text Extractive Summarization
In an era where digital text is proliferating at an unprecedented rate, efficient summarization tools are becoming indispensable. While Large Language Models (LLMs) have been successfully applied in various NLP tasks, their role in extractive text summarization remains underexplored. This paper introduces EYEGLAXS (Easy Yet Efficient larGe LAnguage model for eXtractive Summarization), a framework that leverages LLMs, specifically LLAMA2-7B and ChatGLM2-6B, for extractive summarization of lengthy text documents. Instead of abstractive methods, which often suffer from issues like factual inaccuracies and hallucinations, EYEGLAXS focuses on extractive summarization to ensure factual and grammatical integrity. Utilizing state-of-the-art techniques such as Flash Attention and Parameter-Efficient Fine-Tuning (PEFT), EYEGLAXS addresses the computational and resource challenges typically associated with LLMs. The system sets new performance benchmarks on well-known datasets like PubMed and ArXiv. Furthermore, we extend our research through additional analyses that explore the adaptability of LLMs in handling different sequence lengths and their efficiency in training on smaller datasets. These contributions not only set a new standard in the field but also open up promising avenues for future research in extractive text summarization.
Generating SOAP Notes from Doctor-Patient Conversations Using Modular Summarization Techniques
Following each patient visit, physicians draft long semi-structured clinical summaries called SOAP notes. While invaluable to clinicians and researchers, creating digital SOAP notes is burdensome, contributing to physician burnout. In this paper, we introduce the first complete pipelines to leverage deep summarization models to generate these notes based on transcripts of conversations between physicians and patients. After exploring a spectrum of methods across the extractive-abstractive spectrum, we propose Cluster2Sent, an algorithm that (i) extracts important utterances relevant to each summary section; (ii) clusters together related utterances; and then (iii) generates one summary sentence per cluster. Cluster2Sent outperforms its purely abstractive counterpart by 8 ROUGE-1 points, and produces significantly more factual and coherent sentences as assessed by expert human evaluators. For reproducibility, we demonstrate similar benefits on the publicly available AMI dataset. Our results speak to the benefits of structuring summaries into sections and annotating supporting evidence when constructing summarization corpora.
On Mechanistic Circuits for Extractive Question-Answering
Large language models are increasingly used to process documents and facilitate question-answering on them. In our paper, we extract mechanistic circuits for this real-world language modeling task: context-augmented language modeling for extractive question-answering (QA) tasks and understand the potential benefits of circuits towards downstream applications such as data attribution to context information. We extract circuits as a function of internal model components (e.g., attention heads, MLPs) using causal mediation analysis techniques. Leveraging the extracted circuits, we first understand the interplay between the model's usage of parametric memory and retrieved context towards a better mechanistic understanding of context-augmented language models. We then identify a small set of attention heads in our circuit which performs reliable data attribution by default, thereby obtaining attribution for free in just the model's forward pass. Using this insight, we then introduce ATTNATTRIB, a fast data attribution algorithm which obtains state-of-the-art attribution results across various extractive QA benchmarks. Finally, we show the possibility to steer the language model towards answering from the context, instead of the parametric memory by using the attribution from ATTNATTRIB as an additional signal during the forward pass. Beyond mechanistic understanding, our paper provides tangible applications of circuits in the form of reliable data attribution and model steering.
TOP-Training: Target-Oriented Pretraining for Medical Extractive Question Answering
We study extractive question-answering in the medical domain (Medical-EQA). This problem has two main challenges: (i) domain specificity, as most AI models lack necessary domain knowledge, and (ii) extraction-based answering style, which restricts most autoregressive LLMs due to potential hallucinations. To handle those challenges, we propose TOP-Training, a target-oriented pre-training paradigm that stands out among all domain adaptation techniques with two desirable features: (i) TOP-Training moves one step further than popular domain-oriented fine-tuning since it not only moves closer to the target domain, but also familiarizes itself with the target dataset, and (ii) it does not assume the existence of a large set of unlabeled instances from the target domain. Specifically, for a target Medical-EQA dataset, we extract its entities and leverage large language models (LLMs) to generate synthetic texts containing those entities; we then demonstrate that pretraining on this synthetic text data yields better performance on the target Medical-EQA benchmarks. Overall, our contributions are threefold: (i) TOP-Training, a new pretraining technique to effectively adapt LLMs to better solve a target problem, (ii) TOP-Training has a wide application scope because it does not require the target problem to have a large set of unlabeled data, and (iii) our experiments highlight the limitations of autoregressive LLMs, emphasizing TOP-Training as a means to unlock the true potential of bidirectional LLMs.
A comprehensive review of automatic text summarization techniques: method, data, evaluation and coding
We provide a literature review about Automatic Text Summarization (ATS) systems. We consider a citation-based approach. We start with some popular and well-known papers that we have in hand about each topic we want to cover and we have tracked the "backward citations" (papers that are cited by the set of papers we knew beforehand) and the "forward citations" (newer papers that cite the set of papers we knew beforehand). In order to organize the different methods, we present the diverse approaches to ATS guided by the mechanisms they use to generate a summary. Besides presenting the methods, we also present an extensive review of the datasets available for summarization tasks and the methods used to evaluate the quality of the summaries. Finally, we present an empirical exploration of these methods using the CNN Corpus dataset that provides golden summaries for extractive and abstractive methods.
KV-Distill: Nearly Lossless Learnable Context Compression for LLMs
Sequence-to-sequence tasks often benefit from long contexts, but the quadratic complexity of self-attention in standard Transformers renders this non-trivial. During generation, temporary representations -stored in the so-called KV cache-account for a large portion of GPU memory usage and scale linearly with context length. We introduce KV-Distill, a Transformer compression framework that distills long context KV caches into significantly shorter representations in a question-independent fashion. KV-Distill can be trained as a parameter-efficient adaptor for pretrained models, and enables the compression of arbitrary spans of a context while preserving pre-trained model capabilities. We treat a compressed-uncompressed cache as a student-teacher pairing and apply a KL-type divergence to match the generated outputs. KV-Distill outperforms other compression techniques in worst-case extractive tasks and approaches uncompressed performance in long context question answering and summarization, and it can be fine-tuned on domain-specific contexts to reduce lengths by up to 99% while preserving downstream performance. We demonstrate the generalizability of KV-Distill across various model sizes and architectures.
TimelineQA: A Benchmark for Question Answering over Timelines
Lifelogs are descriptions of experiences that a person had during their life. Lifelogs are created by fusing data from the multitude of digital services, such as online photos, maps, shopping and content streaming services. Question answering over lifelogs can offer personal assistants a critical resource when they try to provide advice in context. However, obtaining answers to questions over lifelogs is beyond the current state of the art of question answering techniques for a variety of reasons, the most pronounced of which is that lifelogs combine free text with some degree of structure such as temporal and geographical information. We create and publicly release TimelineQA1, a benchmark for accelerating progress on querying lifelogs. TimelineQA generates lifelogs of imaginary people. The episodes in the lifelog range from major life episodes such as high school graduation to those that occur on a daily basis such as going for a run. We describe a set of experiments on TimelineQA with several state-of-the-art QA models. Our experiments reveal that for atomic queries, an extractive QA system significantly out-performs a state-of-the-art retrieval-augmented QA system. For multi-hop queries involving aggregates, we show that the best result is obtained with a state-of-the-art table QA technique, assuming the ground truth set of episodes for deriving the answer is available.
Automated Utterance Generation
Conversational AI assistants are becoming popular and question-answering is an important part of any conversational assistant. Using relevant utterances as features in question-answering has shown to improve both the precision and recall for retrieving the right answer by a conversational assistant. Hence, utterance generation has become an important problem with the goal of generating relevant utterances (sentences or phrases) from a knowledge base article that consists of a title and a description. However, generating good utterances usually requires a lot of manual effort, creating the need for an automated utterance generation. In this paper, we propose an utterance generation system which 1) uses extractive summarization to extract important sentences from the description, 2) uses multiple paraphrasing techniques to generate a diverse set of paraphrases of the title and summary sentences, and 3) selects good candidate paraphrases with the help of a novel candidate selection algorithm.
Named entity recognition in chemical patents using ensemble of contextual language models
Chemical patent documents describe a broad range of applications holding key reaction and compound information, such as chemical structure, reaction formulas, and molecular properties. These informational entities should be first identified in text passages to be utilized in downstream tasks. Text mining provides means to extract relevant information from chemical patents through information extraction techniques. As part of the Information Extraction task of the Cheminformatics Elsevier Melbourne University challenge, in this work we study the effectiveness of contextualized language models to extract reaction information in chemical patents. We assess transformer architectures trained on a generic and specialised corpora to propose a new ensemble model. Our best model, based on a majority ensemble approach, achieves an exact F1-score of 92.30% and a relaxed F1-score of 96.24%. The results show that ensemble of contextualized language models can provide an effective method to extract information from chemical patents.
Improving Information Extraction by Acquiring External Evidence with Reinforcement Learning
Most successful information extraction systems operate with access to a large collection of documents. In this work, we explore the task of acquiring and incorporating external evidence to improve extraction accuracy in domains where the amount of training data is scarce. This process entails issuing search queries, extraction from new sources and reconciliation of extracted values, which are repeated until sufficient evidence is collected. We approach the problem using a reinforcement learning framework where our model learns to select optimal actions based on contextual information. We employ a deep Q-network, trained to optimize a reward function that reflects extraction accuracy while penalizing extra effort. Our experiments on two databases -- of shooting incidents, and food adulteration cases -- demonstrate that our system significantly outperforms traditional extractors and a competitive meta-classifier baseline.
Bag of Tricks for Training Data Extraction from Language Models
With the advance of language models, privacy protection is receiving more attention. Training data extraction is therefore of great importance, as it can serve as a potential tool to assess privacy leakage. However, due to the difficulty of this task, most of the existing methods are proof-of-concept and still not effective enough. In this paper, we investigate and benchmark tricks for improving training data extraction using a publicly available dataset. Because most existing extraction methods use a pipeline of generating-then-ranking, i.e., generating text candidates as potential training data and then ranking them based on specific criteria, our research focuses on the tricks for both text generation (e.g., sampling strategy) and text ranking (e.g., token-level criteria). The experimental results show that several previously overlooked tricks can be crucial to the success of training data extraction. Based on the GPT-Neo 1.3B evaluation results, our proposed tricks outperform the baseline by a large margin in most cases, providing a much stronger baseline for future research.
Attention Is Not All You Need Anymore
In recent years, the popular Transformer architecture has achieved great success in many application areas, including natural language processing and computer vision. Many existing works aim to reduce the computational and memory complexity of the self-attention mechanism in the Transformer by trading off performance. However, performance is key for the continuing success of the Transformer. In this paper, a family of drop-in replacements for the self-attention mechanism in the Transformer, called the Extractors, is proposed. Four types of the Extractors, namely the super high-performance Extractor (SHE), the higher-performance Extractor (HE), the worthwhile Extractor (WE), and the minimalist Extractor (ME), are proposed as examples. Experimental results show that replacing the self-attention mechanism with the SHE evidently improves the performance of the Transformer, whereas the simplified versions of the SHE, i.e., the HE, the WE, and the ME, perform close to or better than the self-attention mechanism with less computational and memory complexity. Furthermore, the proposed Extractors have the potential or are able to run faster than the self-attention mechanism since their critical paths of computation are much shorter. Additionally, the sequence prediction problem in the context of text generation is formulated using variable-length discrete-time Markov chains, and the Transformer is reviewed based on our understanding.
Landmarks and Regions: A Robust Approach to Data Extraction
We propose a new approach to extracting data items or field values from semi-structured documents. Examples of such problems include extracting passenger name, departure time and departure airport from a travel itinerary, or extracting price of an item from a purchase receipt. Traditional approaches to data extraction use machine learning or program synthesis to process the whole document to extract the desired fields. Such approaches are not robust to format changes in the document, and the extraction process typically fails even if changes are made to parts of the document that are unrelated to the desired fields of interest. We propose a new approach to data extraction based on the concepts of landmarks and regions. Humans routinely use landmarks in manual processing of documents to zoom in and focus their attention on small regions of interest in the document. Inspired by this human intuition, we use the notion of landmarks in program synthesis to automatically synthesize extraction programs that first extract a small region of interest, and then automatically extract the desired value from the region in a subsequent step. We have implemented our landmark-based extraction approach in a tool LRSyn, and show extensive evaluation on documents in HTML as well as scanned images of invoices and receipts. Our results show that our approach is robust to various types of format changes that routinely happen in real-world settings.
Large Language Models for Generative Information Extraction: A Survey
Information extraction (IE) aims to extract structural knowledge (such as entities, relations, and events) from plain natural language texts. Recently, generative Large Language Models (LLMs) have demonstrated remarkable capabilities in text understanding and generation, allowing for generalization across various domains and tasks. As a result, numerous works have been proposed to harness abilities of LLMs and offer viable solutions for IE tasks based on a generative paradigm. To conduct a comprehensive systematic review and exploration of LLM efforts for IE tasks, in this study, we survey the most recent advancements in this field. We first present an extensive overview by categorizing these works in terms of various IE subtasks and learning paradigms, then we empirically analyze the most advanced methods and discover the emerging trend of IE tasks with LLMs. Based on thorough review conducted, we identify several insights in technique and promising research directions that deserve further exploration in future studies. We maintain a public repository and consistently update related resources at: https://github.com/quqxui/Awesome-LLM4IE-Papers.
Extracting Accurate Materials Data from Research Papers with Conversational Language Models and Prompt Engineering
There has been a growing effort to replace hand extraction of data from research papers with automated data extraction based on natural language processing, language models, and recently, large language models (LLMs). Although these methods enable efficient extraction of data from large sets of research papers, they require a significant amount of up-front effort, expertise, and coding. In this work we propose the ChatExtract method that can fully automate very accurate data extraction with minimal initial effort and background, using an advanced conversational LLM. ChatExtract consists of a set of engineered prompts applied to a conversational LLM that both identify sentences with data, extract that data, and assure the data's correctness through a series of follow-up questions. These follow-up questions largely overcome known issues with LLMs providing factually inaccurate responses. ChatExtract can be applied with any conversational LLMs and yields very high quality data extraction. In tests on materials data we find precision and recall both close to 90% from the best conversational LLMs, like ChatGPT-4. We demonstrate that the exceptional performance is enabled by the information retention in a conversational model combined with purposeful redundancy and introducing uncertainty through follow-up prompts. These results suggest that approaches similar to ChatExtract, due to their simplicity, transferability, and accuracy are likely to become powerful tools for data extraction in the near future. Finally, databases for critical cooling rates of metallic glasses and yield strengths of high entropy alloys are developed using ChatExtract.
Advancing Italian Biomedical Information Extraction with Large Language Models: Methodological Insights and Multicenter Practical Application
The introduction of computerized medical records in hospitals has reduced burdensome operations like manual writing and information fetching. However, the data contained in medical records are still far underutilized, primarily because extracting them from unstructured textual medical records takes time and effort. Information Extraction, a subfield of Natural Language Processing, can help clinical practitioners overcome this limitation, using automated text-mining pipelines. In this work, we created the first Italian neuropsychiatric Named Entity Recognition dataset, PsyNIT, and used it to develop a Large Language Model for this task. Moreover, we conducted several experiments with three external independent datasets to implement an effective multicenter model, with overall F1-score 84.77%, Precision 83.16%, Recall 86.44%. The lessons learned are: (i) the crucial role of a consistent annotation process and (ii) a fine-tuning strategy that combines classical methods with a "few-shot" approach. This allowed us to establish methodological guidelines that pave the way for future implementations in this field and allow Italian hospitals to tap into important research opportunities.
AICC: Parse HTML Finer, Make Models Better -- A 7.3T AI-Ready Corpus Built by a Model-Based HTML Parser
While web data quality is crucial for large language models, most curation efforts focus on filtering and deduplication,treating HTML-to-text extraction as a fixed pre-processing step. Existing web corpora rely on heuristic-based extractors like Trafilatura, which struggle to preserve document structure and frequently corrupt structured elements such as formulas, codes, and tables. We hypothesize that improving extraction quality can be as impactful as aggressive filtering strategies for downstream performance. We introduce MinerU-HTML, a novel extraction pipeline that reformulates content extraction as a sequence labeling problem solved by a 0.6B-parameter language model. Unlike text-density heuristics, MinerU-HTML leverages semantic understanding and employs a two-stage formatting pipeline that explicitly categorizes semantic elements before converting to Markdown. Crucially, its model-based approach is inherently scalable, whereas heuristic methods offer limited improvement pathways. On MainWebBench, our benchmark of 7,887 annotated web pages, MinerU-HTML achieves 81.8\% ROUGE-N F1 compared to Trafilatura's 63.6\%, with exceptional structured element preservation (90.9\% for code blocks, 94.0\% for formulas). Using MinerU-HTML, we construct AICC (AI-ready Common Crawl), a 7.3-trillion token multilingual corpus from two Common Crawl snapshots. In controlled pretraining experiments where AICC and Trafilatura-extracted TfCC undergo identical filtering, models trained on AICC (62B tokens) achieve 50.8\% average accuracy across 13 benchmarks, outperforming TfCC by 1.08pp-providing direct evidence that extraction quality significantly impacts model capabilities. AICC also surpasses RefinedWeb and FineWeb on key benchmarks. We publicly release MainWebBench, MinerU-HTML, and AICC, demonstrating that HTML extraction is a critical, often underestimated component of web corpus construction.
FRAKE: Fusional Real-time Automatic Keyword Extraction
Keyword extraction is the process of identifying the words or phrases that express the main concepts of text to the best of one's ability. Electronic infrastructure creates a considerable amount of text every day and at all times. This massive volume of documents makes it practically impossible for human resources to study and manage them. Nevertheless, the need for these documents to be accessed efficiently and effectively is evident in numerous purposes. A blog, news article, or technical note is considered a relatively long text since the reader aims to learn the subject based on keywords or topics. Our approach consists of a combination of two models: graph centrality features and textural features. The proposed method has been used to extract the best keyword among the candidate keywords with an optimal combination of graph centralities, such as degree, betweenness, eigenvector, closeness centrality and etc, and textural, such as Casing, Term position, Term frequency normalization, Term different sentence, Part Of Speech tagging. There have also been attempts to distinguish keywords from candidate phrases and consider them on separate keywords. For evaluating the proposed method, seven datasets were used: Semeval2010, SemEval2017, Inspec, fao30, Thesis100, pak2018, and Wikinews, with results reported as Precision, Recall, and F- measure. Our proposed method performed much better in terms of evaluation metrics in all reviewed datasets compared with available methods in literature. An approximate 16.9% increase was witnessed in F-score metric and this was much more for the Inspec in English datasets and WikiNews in forgone languages.
Zero-shot information extraction from radiological reports using ChatGPT
Electronic health records contain an enormous amount of valuable information, but many are recorded in free text. Information extraction is the strategy to transform the sequence of characters into structured data, which can be employed for secondary analysis. However, the traditional information extraction components, such as named entity recognition and relation extraction, require annotated data to optimize the model parameters, which has become one of the major bottlenecks in building information extraction systems. With the large language models achieving good performances on various downstream NLP tasks without parameter tuning, it becomes possible to use large language models for zero-shot information extraction. In this study, we aim to explore whether the most popular large language model, ChatGPT, can extract useful information from the radiological reports. We first design the prompt template for the interested information in the CT reports. Then, we generate the prompts by combining the prompt template with the CT reports as the inputs of ChatGPT to obtain the responses. A post-processing module is developed to transform the responses into structured extraction results. We conducted the experiments with 847 CT reports collected from Peking University Cancer Hospital. The experimental results indicate that ChatGPT can achieve competitive performances for some extraction tasks compared with the baseline information extraction system, but some limitations need to be further improved.
Toward Reliable Ad-hoc Scientific Information Extraction: A Case Study on Two Materials Datasets
We explore the ability of GPT-4 to perform ad-hoc schema based information extraction from scientific literature. We assess specifically whether it can, with a basic prompting approach, replicate two existing material science datasets, given the manuscripts from which they were originally manually extracted. We employ materials scientists to perform a detailed manual error analysis to assess where the model struggles to faithfully extract the desired information, and draw on their insights to suggest research directions to address this broadly important task.
Benchmarking Large Language Models with Augmented Instructions for Fine-grained Information Extraction
Information Extraction (IE) is an essential task in Natural Language Processing. Traditional methods have relied on coarse-grained extraction with simple instructions. However, with the emergence of Large Language Models (LLMs), there is a need to adapt IE techniques to leverage the capabilities of these models. This paper introduces a fine-grained IE benchmark dataset tailored for LLMs, employing augmented instructions for each information type, which includes task descriptions, extraction rules, output formats, and examples. Through extensive evaluations, we observe that encoder-decoder models, particularly T5 and FLAN-T5, perform well in generalizing to unseen information types, while ChatGPT exhibits greater adaptability to new task forms. Our results also indicate that performance is not solely dictated by model scale, and highlight the significance of architecture, data diversity, and learning techniques. This work paves the way for a more refined and versatile utilization of LLMs in Information Extraction.
A Reliable Knowledge Processing Framework for Combustion Science using Foundation Models
This research explores the integration of large language models (LLMs) into scientific data assimilation, focusing on combustion science as a case study. Leveraging foundational models integrated with Retrieval-Augmented Generation (RAG) framework, the study introduces an approach to process diverse combustion research data, spanning experimental studies, simulations, and literature. The multifaceted nature of combustion research emphasizes the critical role of knowledge processing in navigating and extracting valuable information from a vast and diverse pool of sources. The developed approach minimizes computational and economic expenses while optimizing data privacy and accuracy. It incorporates prompt engineering and offline open-source LLMs, offering user autonomy in selecting base models. The study provides a thorough examination of text segmentation strategies, conducts comparative studies between LLMs, and explores various optimized prompts to demonstrate the effectiveness of the framework. By incorporating an external database, the framework outperforms a conventional LLM in generating accurate responses and constructing robust arguments. Additionally, the study delves into the investigation of optimized prompt templates for the purpose of efficient extraction of scientific literature. The research addresses concerns related to hallucinations and false research articles by introducing a custom workflow developed with a detection algorithm to filter out inaccuracies. Despite identified areas for improvement, the framework consistently delivers accurate domain-specific responses with minimal human oversight. The prompt-agnostic approach introduced holds promise for future deliberations. The study underscores the significance of integrating LLMs and knowledge processing techniques in scientific research, providing a foundation for advancements in data assimilation and utilization.
Slot Filling for Biomedical Information Extraction
Information Extraction (IE) from text refers to the task of extracting structured knowledge from unstructured text. The task typically consists of a series of sub-tasks such as Named Entity Recognition and Relation Extraction. Sourcing entity and relation type specific training data is a major bottleneck in domains with limited resources such as biomedicine. In this work we present a slot filling approach to the task of biomedical IE, effectively replacing the need for entity and relation-specific training data, allowing us to deal with zero-shot settings. We follow the recently proposed paradigm of coupling a Tranformer-based bi-encoder, Dense Passage Retrieval, with a Transformer-based reading comprehension model to extract relations from biomedical text. We assemble a biomedical slot filling dataset for both retrieval and reading comprehension and conduct a series of experiments demonstrating that our approach outperforms a number of simpler baselines. We also evaluate our approach end-to-end for standard as well as zero-shot settings. Our work provides a fresh perspective on how to solve biomedical IE tasks, in the absence of relevant training data. Our code, models and datasets are available at https://github.com/ypapanik/biomedical-slot-filling.
Generative AI-Based Text Generation Methods Using Pre-Trained GPT-2 Model
This work delved into the realm of automatic text generation, exploring a variety of techniques ranging from traditional deterministic approaches to more modern stochastic methods. Through analysis of greedy search, beam search, top-k sampling, top-p sampling, contrastive searching, and locally typical searching, this work has provided valuable insights into the strengths, weaknesses, and potential applications of each method. Each text-generating method is evaluated using several standard metrics and a comparative study has been made on the performance of the approaches. Finally, some future directions of research in the field of automatic text generation are also identified.
MatKB: Semantic Search for Polycrystalline Materials Synthesis Procedures
In this paper, we present a novel approach to knowledge extraction and retrieval using Natural Language Processing (NLP) techniques for material science. Our goal is to automatically mine structured knowledge from millions of research articles in the field of polycrystalline materials and make it easily accessible to the broader community. The proposed method leverages NLP techniques such as entity recognition and document classification to extract relevant information and build an extensive knowledge base, from a collection of 9.5 Million publications. The resulting knowledge base is integrated into a search engine, which enables users to search for information about specific materials, properties, and experiments with greater precision than traditional search engines like Google. We hope our results can enable material scientists quickly locate desired experimental procedures, compare their differences, and even inspire them to design new experiments. Our website will be available at Github https://github.com/Xianjun-Yang/PcMSP.git soon.
Easy-to-Hard Learning for Information Extraction
Information extraction (IE) systems aim to automatically extract structured information, such as named entities, relations between entities, and events, from unstructured texts. While most existing work addresses a particular IE task, universally modeling various IE tasks with one model has achieved great success recently. Despite their success, they employ a one-stage learning strategy, i.e., directly learning to extract the target structure given the input text, which contradicts the human learning process. In this paper, we propose a unified easy-to-hard learning framework consisting of three stages, i.e., the easy stage, the hard stage, and the main stage, for IE by mimicking the human learning process. By breaking down the learning process into multiple stages, our framework facilitates the model to acquire general IE task knowledge and improve its generalization ability. Extensive experiments across four IE tasks demonstrate the effectiveness of our framework. We achieve new state-of-the-art results on 13 out of 17 datasets. Our code is available at https://github.com/DAMO-NLP-SG/IE-E2H.
Fundus: A Simple-to-Use News Scraper Optimized for High Quality Extractions
This paper introduces Fundus, a user-friendly news scraper that enables users to obtain millions of high-quality news articles with just a few lines of code. Unlike existing news scrapers, we use manually crafted, bespoke content extractors that are specifically tailored to the formatting guidelines of each supported online newspaper. This allows us to optimize our scraping for quality such that retrieved news articles are textually complete and without HTML artifacts. Further, our framework combines both crawling (retrieving HTML from the web or large web archives) and content extraction into a single pipeline. By providing a unified interface for a predefined collection of newspapers, we aim to make Fundus broadly usable even for non-technical users. This paper gives an overview of the framework, discusses our design choices, and presents a comparative evaluation against other popular news scrapers. Our evaluation shows that Fundus yields significantly higher quality extractions (complete and artifact-free news articles) than prior work. The framework is available on GitHub under https://github.com/flairNLP/fundus and can be simply installed using pip.
Retrieval-Augmented Generation-based Relation Extraction
Information Extraction (IE) is a transformative process that converts unstructured text data into a structured format by employing entity and relation extraction (RE) methodologies. The identification of the relation between a pair of entities plays a crucial role within this framework. Despite the existence of various techniques for relation extraction, their efficacy heavily relies on access to labeled data and substantial computational resources. In addressing these challenges, Large Language Models (LLMs) emerge as promising solutions; however, they might return hallucinating responses due to their own training data. To overcome these limitations, Retrieved-Augmented Generation-based Relation Extraction (RAG4RE) in this work is proposed, offering a pathway to enhance the performance of relation extraction tasks. This work evaluated the effectiveness of our RAG4RE approach utilizing different LLMs. Through the utilization of established benchmarks, such as TACRED, TACREV, Re-TACRED, and SemEval RE datasets, our aim is to comprehensively evaluate the efficacy of our RAG4RE approach. In particularly, we leverage prominent LLMs including Flan T5, Llama2, and Mistral in our investigation. The results of our study demonstrate that our RAG4RE approach surpasses performance of traditional RE approaches based solely on LLMs, particularly evident in the TACRED dataset and its variations. Furthermore, our approach exhibits remarkable performance compared to previous RE methodologies across both TACRED and TACREV datasets, underscoring its efficacy and potential for advancing RE tasks in natural language processing.
Extracting Mathematical Concepts with Large Language Models
We extract mathematical concepts from mathematical text using generative large language models (LLMs) like ChatGPT, contributing to the field of automatic term extraction (ATE) and mathematical text processing, and also to the study of LLMs themselves. Our work builds on that of others in that we aim for automatic extraction of terms (keywords) in one mathematical field, category theory, using as a corpus the 755 abstracts from a snapshot of the online journal "Theory and Applications of Categories", circa 2020. Where our study diverges from previous work is in (1) providing a more thorough analysis of what makes mathematical term extraction a difficult problem to begin with; (2) paying close attention to inter-annotator disagreements; (3) providing a set of guidelines which both human and machine annotators could use to standardize the extraction process; (4) introducing a new annotation tool to help humans with ATE, applicable to any mathematical field and even beyond mathematics; (5) using prompts to ChatGPT as part of the extraction process, and proposing best practices for such prompts; and (6) raising the question of whether ChatGPT could be used as an annotator on the same level as human experts. Our overall findings are that the matter of mathematical ATE is an interesting field which can benefit from participation by LLMs, but LLMs themselves cannot at this time surpass human performance on it.
Toward Robust URL Extraction for Open Science: A Study of arXiv File Formats and Temporal Trends
In this work, we study how URL extraction results depend on input format. We compiled a pilot dataset by extracting URLs from 10 arXiv papers and used the same heuristic method to extract URLs from four formats derived from the PDF files or the source LaTeX files. We found that accurate and complete URL extraction from any single format or a combination of multiple formats is challenging, with the best F1-score of 0.71. Using the pilot dataset, we evaluate extraction performance across formats and show that structured formats like HTML and XML produce more accurate results than PDFs or Text. Combining multiple formats improves coverage, especially when targeting research-critical resources. We further apply URL extraction on two tasks, namely classifying URLs into open-access datasets and software and the others, and analyzing the trend of URLs usage in arXiv papers from 1992 to 2024. These results suggest that using a combination of multiple formats achieves better performance on URL extraction than a single format, and the number of URLs in arXiv papers has been steadily increasing since 1992 to 2014 and has been drastically increasing from 2014 to 2024. The dataset and the Jupyter notebooks used for the preliminary analysis are publicly available at https://github.com/lamps-lab/arxiv-urls
Structured information extraction from complex scientific text with fine-tuned large language models
Intelligently extracting and linking complex scientific information from unstructured text is a challenging endeavor particularly for those inexperienced with natural language processing. Here, we present a simple sequence-to-sequence approach to joint named entity recognition and relation extraction for complex hierarchical information in scientific text. The approach leverages a pre-trained large language model (LLM), GPT-3, that is fine-tuned on approximately 500 pairs of prompts (inputs) and completions (outputs). Information is extracted either from single sentences or across sentences in abstracts/passages, and the output can be returned as simple English sentences or a more structured format, such as a list of JSON objects. We demonstrate that LLMs trained in this way are capable of accurately extracting useful records of complex scientific knowledge for three representative tasks in materials chemistry: linking dopants with their host materials, cataloging metal-organic frameworks, and general chemistry/phase/morphology/application information extraction. This approach represents a simple, accessible, and highly-flexible route to obtaining large databases of structured knowledge extracted from unstructured text. An online demo is available at http://www.matscholar.com/info-extraction.
Separate the Wheat from the Chaff: Model Deficiency Unlearning via Parameter-Efficient Module Operation
Large language models (LLMs) have been widely used in various applications but are known to suffer from issues related to untruthfulness and toxicity. While parameter-efficient modules (PEMs) have demonstrated their effectiveness in equipping models with new skills, leveraging PEMs for deficiency unlearning remains underexplored. In this work, we propose a PEMs operation approach, namely Extraction-before-Subtraction (Ext-Sub), to enhance the truthfulness and detoxification of LLMs through the integration of ``expert'' PEM and ``anti-expert'' PEM. Remarkably, even anti-expert PEM possess valuable capabilities due to their proficiency in generating fabricated content, which necessitates language modeling and logical narrative competence. Rather than merely negating the parameters, our approach involves extracting and eliminating solely the deficiency capability within anti-expert PEM while preserving the general capabilities. To evaluate the effectiveness of our approach in terms of truthfulness and detoxification, we conduct extensive experiments on LLMs, encompassing additional abilities such as language modeling and mathematical reasoning. Our empirical results demonstrate that our approach effectively improves truthfulness and detoxification, while largely preserving the fundamental abilities of LLMs.
A Survey on Deep Neural Network Pruning-Taxonomy, Comparison, Analysis, and Recommendations
Modern deep neural networks, particularly recent large language models, come with massive model sizes that require significant computational and storage resources. To enable the deployment of modern models on resource-constrained environments and accelerate inference time, researchers have increasingly explored pruning techniques as a popular research direction in neural network compression. However, there is a dearth of up-to-date comprehensive review papers on pruning. To address this issue, in this survey, we provide a comprehensive review of existing research works on deep neural network pruning in a taxonomy of 1) universal/specific speedup, 2) when to prune, 3) how to prune, and 4) fusion of pruning and other compression techniques. We then provide a thorough comparative analysis of seven pairs of contrast settings for pruning (e.g., unstructured/structured) and explore emerging topics, including post-training pruning, different levels of supervision for pruning, and broader applications (e.g., adversarial robustness) to shed light on the commonalities and differences of existing methods and lay the foundation for further method development. To facilitate future research, we build a curated collection of datasets, networks, and evaluations on different applications. Finally, we provide some valuable recommendations on selecting pruning methods and prospect promising research directions. We build a repository at https://github.com/hrcheng1066/awesome-pruning.
Keyphrase Cloud Generation of Broadcast News
This paper describes an enhanced automatic keyphrase extraction method applied to Broadcast News. The keyphrase extraction process is used to create a concept level for each news. On top of words resulting from a speech recognition system output and news indexation and it contributes to the generation of a tag/keyphrase cloud of the top news included in a Multimedia Monitoring Solution system for TV and Radio news/programs, running daily, and monitoring 12 TV channels and 4 Radios.
LEEC: A Legal Element Extraction Dataset with an Extensive Domain-Specific Label System
As a pivotal task in natural language processing, element extraction has gained significance in the legal domain. Extracting legal elements from judicial documents helps enhance interpretative and analytical capacities of legal cases, and thereby facilitating a wide array of downstream applications in various domains of law. Yet existing element extraction datasets are limited by their restricted access to legal knowledge and insufficient coverage of labels. To address this shortfall, we introduce a more comprehensive, large-scale criminal element extraction dataset, comprising 15,831 judicial documents and 159 labels. This dataset was constructed through two main steps: first, designing the label system by our team of legal experts based on prior legal research which identified critical factors driving and processes generating sentencing outcomes in criminal cases; second, employing the legal knowledge to annotate judicial documents according to the label system and annotation guideline. The Legal Element ExtraCtion dataset (LEEC) represents the most extensive and domain-specific legal element extraction dataset for the Chinese legal system. Leveraging the annotated data, we employed various SOTA models that validates the applicability of LEEC for Document Event Extraction (DEE) task. The LEEC dataset is available on https://github.com/THUlawtech/LEEC .
New Methods for Metadata Extraction from Scientific Literature
Within the past few decades we have witnessed digital revolution, which moved scholarly communication to electronic media and also resulted in a substantial increase in its volume. Nowadays keeping track with the latest scientific achievements poses a major challenge for the researchers. Scientific information overload is a severe problem that slows down scholarly communication and knowledge propagation across the academia. Modern research infrastructures facilitate studying scientific literature by providing intelligent search tools, proposing similar and related documents, visualizing citation and author networks, assessing the quality and impact of the articles, and so on. In order to provide such high quality services the system requires the access not only to the text content of stored documents, but also to their machine-readable metadata. Since in practice good quality metadata is not always available, there is a strong demand for a reliable automatic method of extracting machine-readable metadata directly from source documents. This research addresses these problems by proposing an automatic, accurate and flexible algorithm for extracting wide range of metadata directly from scientific articles in born-digital form. Extracted information includes basic document metadata, structured full text and bibliography section. Designed as a universal solution, proposed algorithm is able to handle a vast variety of publication layouts with high precision and thus is well-suited for analyzing heterogeneous document collections. This was achieved by employing supervised and unsupervised machine-learning algorithms trained on large, diverse datasets. The evaluation we conducted showed good performance of proposed metadata extraction algorithm. The comparison with other similar solutions also proved our algorithm performs better than competition for most metadata types.
Retrieval-Augmented Code Generation for Universal Information Extraction
Information Extraction (IE) aims to extract structural knowledge (e.g., entities, relations, events) from natural language texts, which brings challenges to existing methods due to task-specific schemas and complex text expressions. Code, as a typical kind of formalized language, is capable of describing structural knowledge under various schemas in a universal way. On the other hand, Large Language Models (LLMs) trained on both codes and texts have demonstrated powerful capabilities of transforming texts into codes, which provides a feasible solution to IE tasks. Therefore, in this paper, we propose a universal retrieval-augmented code generation framework based on LLMs, called Code4UIE, for IE tasks. Specifically, Code4UIE adopts Python classes to define task-specific schemas of various structural knowledge in a universal way. By so doing, extracting knowledge under these schemas can be transformed into generating codes that instantiate the predefined Python classes with the information in texts. To generate these codes more precisely, Code4UIE adopts the in-context learning mechanism to instruct LLMs with examples. In order to obtain appropriate examples for different tasks, Code4UIE explores several example retrieval strategies, which can retrieve examples semantically similar to the given texts. Extensive experiments on five representative IE tasks across nine datasets demonstrate the effectiveness of the Code4UIE framework.
SemEval 2017 Task 10: ScienceIE - Extracting Keyphrases and Relations from Scientific Publications
We describe the SemEval task of extracting keyphrases and relations between them from scientific documents, which is crucial for understanding which publications describe which processes, tasks and materials. Although this was a new task, we had a total of 26 submissions across 3 evaluation scenarios. We expect the task and the findings reported in this paper to be relevant for researchers working on understanding scientific content, as well as the broader knowledge base population and information extraction communities.
Instruct and Extract: Instruction Tuning for On-Demand Information Extraction
Large language models with instruction-following capabilities open the door to a wider group of users. However, when it comes to information extraction - a classic task in natural language processing - most task-specific systems cannot align well with long-tail ad hoc extraction use cases for non-expert users. To address this, we propose a novel paradigm, termed On-Demand Information Extraction, to fulfill the personalized demands of real-world users. Our task aims to follow the instructions to extract the desired content from the associated text and present it in a structured tabular format. The table headers can either be user-specified or inferred contextually by the model. To facilitate research in this emerging area, we present a benchmark named InstructIE, inclusive of both automatically generated training data, as well as the human-annotated test set. Building on InstructIE, we further develop an On-Demand Information Extractor, ODIE. Comprehensive evaluations on our benchmark reveal that ODIE substantially outperforms the existing open-source models of similar size. Our code and dataset are released on https://github.com/yzjiao/On-Demand-IE.
SemRe-Rank: Improving Automatic Term Extraction By Incorporating Semantic Relatedness With Personalised PageRank
Automatic Term Extraction deals with the extraction of terminology from a domain specific corpus, and has long been an established research area in data and knowledge acquisition. ATE remains a challenging task as it is known that there is no existing ATE methods that can consistently outperform others in any domain. This work adopts a refreshed perspective to this problem: instead of searching for such a 'one-size-fit-all' solution that may never exist, we propose to develop generic methods to 'enhance' existing ATE methods. We introduce SemRe-Rank, the first method based on this principle, to incorporate semantic relatedness - an often overlooked venue - into an existing ATE method to further improve its performance. SemRe-Rank incorporates word embeddings into a personalised PageRank process to compute 'semantic importance' scores for candidate terms from a graph of semantically related words (nodes), which are then used to revise the scores of candidate terms computed by a base ATE algorithm. Extensively evaluated with 13 state-of-the-art base ATE methods on four datasets of diverse nature, it is shown to have achieved widespread improvement over all base methods and across all datasets, with up to 15 percentage points when measured by the Precision in the top ranked K candidate terms (the average for a set of K's), or up to 28 percentage points in F1 measured at a K that equals to the expected real terms in the candidates (F1 in short). Compared to an alternative approach built on the well-known TextRank algorithm, SemRe-Rank can potentially outperform by up to 8 points in Precision at top K, or up to 17 points in F1.
Schema-Driven Information Extraction from Heterogeneous Tables
In this paper, we explore the question of whether large language models can support cost-efficient information extraction from tables. We introduce schema-driven information extraction, a new task that transforms tabular data into structured records following a human-authored schema. To assess various LLM's capabilities on this task, we present a benchmark comprised of tables from four diverse domains: machine learning papers, chemistry literature, material science journals, and webpages. We use this collection of annotated tables to evaluate the ability of open-source and API-based language models to extract information from tables covering diverse domains and data formats. Our experiments demonstrate that surprisingly competitive performance can be achieved without requiring task-specific pipelines or labels, achieving F1 scores ranging from 74.2 to 96.1, while maintaining cost efficiency. Moreover, through detailed ablation studies and analyses, we investigate the factors contributing to model success and validate the practicality of distilling compact models to reduce API reliance.
Leveraging Large Language Models for Web Scraping
Large Language Models (LLMs) demonstrate remarkable capabilities in replicating human tasks and boosting productivity. However, their direct application for data extraction presents limitations due to a prioritisation of fluency over factual accuracy and a restricted ability to manipulate specific information. Therefore to overcome these limitations, this research leverages the knowledge representation power of pre-trained LLMs and the targeted information access enabled by RAG models, this research investigates a general-purpose accurate data scraping recipe for RAG models designed for language generation. To capture knowledge in a more modular and interpretable way, we use pre trained language models with a latent knowledge retriever, which allows the model to retrieve and attend over documents from a large corpus. We utilised RAG model architecture and did an in-depth analysis of their capabilities under three tasks: (i) Semantic Classification of HTML elements, (ii) Chunking HTML text for effective understanding, and (iii) comparing results from different LLMs and ranking algorithms. While previous work has developed dedicated architectures and training procedures for HTML understanding and extraction, we show that LLMs pre-trained on standard natural language with an addition of effective chunking, searching and ranking algorithms, can prove to be efficient data scraping tool to extract complex data from unstructured text. Future research directions include addressing the challenges of provenance tracking and dynamic knowledge updates within the proposed RAG-based data extraction framework. By overcoming these limitations, this approach holds the potential to revolutionise data extraction from vast repositories of textual information.
ZS4IE: A toolkit for Zero-Shot Information Extraction with simple Verbalizations
The current workflow for Information Extraction (IE) analysts involves the definition of the entities/relations of interest and a training corpus with annotated examples. In this demonstration we introduce a new workflow where the analyst directly verbalizes the entities/relations, which are then used by a Textual Entailment model to perform zero-shot IE. We present the design and implementation of a toolkit with a user interface, as well as experiments on four IE tasks that show that the system achieves very good performance at zero-shot learning using only 5--15 minutes per type of a user's effort. Our demonstration system is open-sourced at https://github.com/BBN-E/ZS4IE . A demonstration video is available at https://vimeo.com/676138340 .
How Optimal is Greedy Decoding for Extractive Question Answering?
Fine-tuned language models use greedy decoding to answer reading comprehension questions with relative success. However, this approach does not ensure that the answer is a span in the given passage, nor does it guarantee that it is the most probable one. Does greedy decoding actually perform worse than an algorithm that does adhere to these properties? To study the performance and optimality of greedy decoding, we present exact-extract, a decoding algorithm that efficiently finds the most probable answer span in the context. We compare the performance of T5 with both decoding algorithms on zero-shot and few-shot extractive question answering. When no training examples are available, exact-extract significantly outperforms greedy decoding. However, greedy decoding quickly converges towards the performance of exact-extract with the introduction of a few training examples, becoming more extractive and increasingly likelier to generate the most probable span as the training set grows. We also show that self-supervised training can bias the model towards extractive behavior, increasing performance in the zero-shot setting without resorting to annotated examples. Overall, our results suggest that pretrained language models are so good at adapting to extractive question answering, that it is often enough to fine-tune on a small training set for the greedy algorithm to emulate the optimal decoding strategy.
A Biomedical Entity Extraction Pipeline for Oncology Health Records in Portuguese
Textual health records of cancer patients are usually protracted and highly unstructured, making it very time-consuming for health professionals to get a complete overview of the patient's therapeutic course. As such limitations can lead to suboptimal and/or inefficient treatment procedures, healthcare providers would greatly benefit from a system that effectively summarizes the information of those records. With the advent of deep neural models, this objective has been partially attained for English clinical texts, however, the research community still lacks an effective solution for languages with limited resources. In this paper, we present the approach we developed to extract procedures, drugs, and diseases from oncology health records written in European Portuguese. This project was conducted in collaboration with the Portuguese Institute for Oncology which, besides holding over 10 years of duly protected medical records, also provided oncologist expertise throughout the development of the project. Since there is no annotated corpus for biomedical entity extraction in Portuguese, we also present the strategy we followed in annotating the corpus for the development of the models. The final models, which combined a neural architecture with entity linking, achieved F_1 scores of 88.6, 95.0, and 55.8 per cent in the mention extraction of procedures, drugs, and diseases, respectively.
From LAION-5B to LAION-EO: Filtering Billions of Images Using Anchor Datasets for Satellite Image Extraction
Large datasets, such as LAION-5B, contain a diverse distribution of images shared online. However, extraction of domain-specific subsets of large image corpora is challenging. The extraction approach based on an anchor dataset, combined with further filtering, is proposed here and demonstrated for the domain of satellite imagery. This results in the release of LAION-EO, a dataset sourced from the web containing pairs of text and satellite images in high (pixel-wise) resolution. The paper outlines the acquisition procedure as well as some of the features of the dataset.
Measuring memorization through probabilistic discoverable extraction
Large language models (LLMs) are susceptible to memorizing training data, raising concerns due to the potential extraction of sensitive information. Current methods to measure memorization rates of LLMs, primarily discoverable extraction (Carlini et al., 2022), rely on single-sequence greedy sampling, potentially underestimating the true extent of memorization. This paper introduces a probabilistic relaxation of discoverable extraction that quantifies the probability of extracting a target sequence within a set of generated samples, considering various sampling schemes and multiple attempts. This approach addresses the limitations of reporting memorization rates through discoverable extraction by accounting for the probabilistic nature of LLMs and user interaction patterns. Our experiments demonstrate that this probabilistic measure can reveal cases of higher memorization rates compared to rates found through discoverable extraction. We further investigate the impact of different sampling schemes on extractability, providing a more comprehensive and realistic assessment of LLM memorization and its associated risks. Our contributions include a new probabilistic memorization definition, empirical evidence of its effectiveness, and a thorough evaluation across different models, sizes, sampling schemes, and training data repetitions.
NESTLE: a No-Code Tool for Statistical Analysis of Legal Corpus
The statistical analysis of large scale legal corpus can provide valuable legal insights. For such analysis one needs to (1) select a subset of the corpus using document retrieval tools, (2) structuralize text using information extraction (IE) systems, and (3) visualize the data for the statistical analysis. Each process demands either specialized tools or programming skills whereas no comprehensive unified "no-code" tools have been available. Especially for IE, if the target information is not predefined in the ontology of the IE system, one needs to build their own system. Here we provide NESTLE, a no code tool for large-scale statistical analysis of legal corpus. With NESTLE, users can search target documents, extract information, and visualize the structured data all via the chat interface with accompanying auxiliary GUI for the fine-level control. NESTLE consists of three main components: a search engine, an end-to-end IE system, and a Large Language Model (LLM) that glues the whole components together and provides the chat interface. Powered by LLM and the end-to-end IE system, NESTLE can extract any type of information that has not been predefined in the IE system opening up the possibility of unlimited customizable statistical analysis of the corpus without writing a single line of code. The use of the custom end-to-end IE system also enables faster and low-cost IE on large scale corpus. We validate our system on 15 Korean precedent IE tasks and 3 legal text classification tasks from LEXGLUE. The comprehensive experiments reveal NESTLE can achieve GPT-4 comparable performance by training the internal IE module with 4 human-labeled, and 192 LLM-labeled examples. The detailed analysis provides the insight on the trade-off between accuracy, time, and cost in building such system.
A Hybrid Architecture with Efficient Fine Tuning for Abstractive Patent Document Summarization
Automatic patent summarization approaches that help in the patent analysis and comprehension procedure are in high demand due to the colossal growth of innovations. The development of natural language processing (NLP), text mining, and deep learning has notably amplified the efficacy of text summarization models for abundant types of documents. Summarizing patent text remains a pertinent challenge due to the labyrinthine writing style of these documents, which includes technical and legal intricacies. Additionally, these patent document contents are considerably lengthier than archetypal documents, which complicates the process of extracting pertinent information for summarization. Embodying extractive and abstractive text summarization methodologies into a hybrid framework, this study proposes a system for efficiently creating abstractive summaries of patent records. The procedure involves leveraging the LexRank graph-based algorithm to retrieve the important sentences from input parent texts, then utilizing a Bidirectional Auto-Regressive Transformer (BART) model that has been fine-tuned using Low-Ranking Adaptation (LoRA) for producing text summaries. This is accompanied by methodical testing and evaluation strategies. Furthermore, the author employed certain meta-learning techniques to achieve Domain Generalization (DG) of the abstractive component across multiple patent fields.
Newsroom: A Dataset of 1.3 Million Summaries with Diverse Extractive Strategies
We present NEWSROOM, a summarization dataset of 1.3 million articles and summaries written by authors and editors in newsrooms of 38 major news publications. Extracted from search and social media metadata between 1998 and 2017, these high-quality summaries demonstrate high diversity of summarization styles. In particular, the summaries combine abstractive and extractive strategies, borrowing words and phrases from articles at varying rates. We analyze the extraction strategies used in NEWSROOM summaries against other datasets to quantify the diversity and difficulty of our new data, and train existing methods on the data to evaluate its utility and challenges.
ARLED: Leveraging LED-based ARMAN Model for Abstractive Summarization of Persian Long Documents
The increasing volume of textual data poses challenges in reading and comprehending large documents, particularly for scholars who need to extract useful information from research articles. Automatic text summarization has emerged as a powerful tool to condense lengthy documents into concise and informative summaries. Depending on the approach used, text summarization can be categorized as either extractive or abstractive. While extractive methods are commonly used due to their simplicity, they often miss important information. On the other hand, Abstractive Summarization can generate more coherent and informative summaries by understanding the underlying meaning of the text. Abstractive techniques have gained attention in various languages, and recent advancements have been achieved through pre-training models such as BERT, BART, and T5. However, the challenge of summarizing long documents remains, and alternative models like Longformer have been introduced to address this limitation. In this context, this paper focuses on abstractive summarization in the Persian language. The authors introduce a new dataset of 300,000 full-text Persian papers obtained from the Ensani website and apply the ARMAN model, based on the Longformer architecture, to generate summaries. The experimental results demonstrate promising performance in Persian text summarization. The paper provides a comprehensive overview of related work, discusses the methodology, presents the experimental results, and concludes with future research directions.
Detecting Relevant Information in High-Volume Chat Logs: Keyphrase Extraction for Grooming and Drug Dealing Forensic Analysis
The growing use of digital communication platforms has given rise to various criminal activities, such as grooming and drug dealing, which pose significant challenges to law enforcement and forensic experts. This paper presents a supervised keyphrase extraction approach to detect relevant information in high-volume chat logs involving grooming and drug dealing for forensic analysis. The proposed method, JointKPE++, builds upon the JointKPE keyphrase extractor by employing improvements to handle longer texts effectively. We evaluate JointKPE++ using BERT-based pre-trained models on grooming and drug dealing datasets, including BERT, RoBERTa, SpanBERT, and BERTimbau. The results show significant improvements over traditional approaches and demonstrate the potential for JointKPE++ to aid forensic experts in efficiently detecting keyphrases related to criminal activities.
MIR: Methodology Inspiration Retrieval for Scientific Research Problems
There has been a surge of interest in harnessing the reasoning capabilities of Large Language Models (LLMs) to accelerate scientific discovery. While existing approaches rely on grounding the discovery process within the relevant literature, effectiveness varies significantly with the quality and nature of the retrieved literature. We address the challenge of retrieving prior work whose concepts can inspire solutions for a given research problem, a task we define as Methodology Inspiration Retrieval (MIR). We construct a novel dataset tailored for training and evaluating retrievers on MIR, and establish baselines. To address MIR, we build the Methodology Adjacency Graph (MAG); capturing methodological lineage through citation relationships. We leverage MAG to embed an "intuitive prior" into dense retrievers for identifying patterns of methodological inspiration beyond superficial semantic similarity. This achieves significant gains of +5.4 in Recall@3 and +7.8 in Mean Average Precision (mAP) over strong baselines. Further, we adapt LLM-based re-ranking strategies to MIR, yielding additional improvements of +4.5 in Recall@3 and +4.8 in mAP. Through extensive ablation studies and qualitative analyses, we exhibit the promise of MIR in enhancing automated scientific discovery and outline avenues for advancing inspiration-driven retrieval.
Reliable End-to-End Material Information Extraction from the Literature with Source-Tracked Multi-Stage Large Language Models
Data-driven materials discovery requires large-scale experimental datasets, yet most of the information remains trapped in unstructured literature. Existing extraction efforts often focus on a limited set of features and have not addressed the integrated composition-processing-microstructure-property relationships essential for understanding materials behavior, thereby posing challenges for building comprehensive databases. To address this gap, we propose a multi-stage information extraction pipeline powered by large language models, which captures 47 features spanning composition, processing, microstructure, and properties exclusively from experimentally reported materials. The pipeline integrates iterative extraction with source tracking to enhance both accuracy and reliability. Evaluations at the feature level (independent attributes) and tuple level (interdependent features) yielded F1 scores around 0.96. Compared with single-pass extraction without source tracking, our approach improved F1 scores of microstructure category by 10.0% (feature level) and 13.7% (tuple level), and reduced missed materials from 49 to 13 out of 396 materials in 100 articles on precipitate-containing multi-principal element alloys (miss rate reduced from 12.4% to 3.3%). The pipeline enables scalable and efficient literature mining, producing databases with high precision, minimal omissions, and zero false positives. These datasets provide trustworthy inputs for machine learning and materials informatics, while the modular design generalizes to diverse material classes, enabling comprehensive materials information extraction.
What's In Your Field? Mapping Scientific Research with Knowledge Graphs and Large Language Models
The scientific literature's exponential growth makes it increasingly challenging to navigate and synthesize knowledge across disciplines. Large language models (LLMs) are powerful tools for understanding scientific text, but they fail to capture detailed relationships across large bodies of work. Unstructured approaches, like retrieval augmented generation, can sift through such corpora to recall relevant facts; however, when millions of facts influence the answer, unstructured approaches become cost prohibitive. Structured representations offer a natural complement -- enabling systematic analysis across the whole corpus. Recent work enhances LLMs with unstructured or semistructured representations of scientific concepts; to complement this, we try extracting structured representations using LLMs. By combining LLMs' semantic understanding with a schema of scientific concepts, we prototype a system that answers precise questions about the literature as a whole. Our schema applies across scientific fields and we extract concepts from it using only 20 manually annotated abstracts. To demonstrate the system, we extract concepts from 30,000 papers on arXiv spanning astrophysics, fluid dynamics, and evolutionary biology. The resulting database highlights emerging trends and, by visualizing the knowledge graph, offers new ways to explore the ever-growing landscape of scientific knowledge. Demo: abby101/surveyor-0 on HF Spaces. Code: https://github.com/chiral-carbon/kg-for-science.
Targeted Attack on GPT-Neo for the SATML Language Model Data Extraction Challenge
Previous work has shown that Large Language Models are susceptible to so-called data extraction attacks. This allows an attacker to extract a sample that was contained in the training data, which has massive privacy implications. The construction of data extraction attacks is challenging, current attacks are quite inefficient, and there exists a significant gap in the extraction capabilities of untargeted attacks and memorization. Thus, targeted attacks are proposed, which identify if a given sample from the training data, is extractable from a model. In this work, we apply a targeted data extraction attack to the SATML2023 Language Model Training Data Extraction Challenge. We apply a two-step approach. In the first step, we maximise the recall of the model and are able to extract the suffix for 69% of the samples. In the second step, we use a classifier-based Membership Inference Attack on the generations. Our AutoSklearn classifier achieves a precision of 0.841. The full approach reaches a score of 0.405 recall at a 10% false positive rate, which is an improvement of 34% over the baseline of 0.301.
AxCell: Automatic Extraction of Results from Machine Learning Papers
Tracking progress in machine learning has become increasingly difficult with the recent explosion in the number of papers. In this paper, we present AxCell, an automatic machine learning pipeline for extracting results from papers. AxCell uses several novel components, including a table segmentation subtask, to learn relevant structural knowledge that aids extraction. When compared with existing methods, our approach significantly improves the state of the art for results extraction. We also release a structured, annotated dataset for training models for results extraction, and a dataset for evaluating the performance of models on this task. Lastly, we show the viability of our approach enables it to be used for semi-automated results extraction in production, suggesting our improvements make this task practically viable for the first time. Code is available on GitHub.
Can Indirect Prompt Injection Attacks Be Detected and Removed?
Prompt injection attacks manipulate large language models (LLMs) by misleading them to deviate from the original input instructions and execute maliciously injected instructions, because of their instruction-following capabilities and inability to distinguish between the original input instructions and maliciously injected instructions. To defend against such attacks, recent studies have developed various detection mechanisms. If we restrict ourselves specifically to works which perform detection rather than direct defense, most of them focus on direct prompt injection attacks, while there are few works for the indirect scenario, where injected instructions are indirectly from external tools, such as a search engine. Moreover, current works mainly investigate injection detection methods and pay less attention to the post-processing method that aims to mitigate the injection after detection. In this paper, we investigate the feasibility of detecting and removing indirect prompt injection attacks, and we construct a benchmark dataset for evaluation. For detection, we assess the performance of existing LLMs and open-source detection models, and we further train detection models using our crafted training datasets. For removal, we evaluate two intuitive methods: (1) the segmentation removal method, which segments the injected document and removes parts containing injected instructions, and (2) the extraction removal method, which trains an extraction model to identify and remove injected instructions.
MinerU: An Open-Source Solution for Precise Document Content Extraction
Document content analysis has been a crucial research area in computer vision. Despite significant advancements in methods such as OCR, layout detection, and formula recognition, existing open-source solutions struggle to consistently deliver high-quality content extraction due to the diversity in document types and content. To address these challenges, we present MinerU, an open-source solution for high-precision document content extraction. MinerU leverages the sophisticated PDF-Extract-Kit models to extract content from diverse documents effectively and employs finely-tuned preprocessing and postprocessing rules to ensure the accuracy of the final results. Experimental results demonstrate that MinerU consistently achieves high performance across various document types, significantly enhancing the quality and consistency of content extraction. The MinerU open-source project is available at https://github.com/opendatalab/MinerU.
Science Checker Reloaded: A Bidirectional Paradigm for Transparency and Logical Reasoning
Information retrieval is a rapidly evolving field. However it still faces significant limitations in the scientific and industrial vast amounts of information, such as semantic divergence and vocabulary gaps in sparse retrieval, low precision and lack of interpretability in semantic search, or hallucination and outdated information in generative models. In this paper, we introduce a two-block approach to tackle these hurdles for long documents. The first block enhances language understanding in sparse retrieval by query expansion to retrieve relevant documents. The second block deepens the result by providing comprehensive and informative answers to the complex question using only the information spread in the long document, enabling bidirectional engagement. At various stages of the pipeline, intermediate results are presented to users to facilitate understanding of the system's reasoning. We believe this bidirectional approach brings significant advancements in terms of transparency, logical thinking, and comprehensive understanding in the field of scientific information retrieval.
Refiner: Restructure Retrieval Content Efficiently to Advance Question-Answering Capabilities
Large Language Models (LLMs) are limited by their parametric knowledge, leading to hallucinations in knowledge-extensive tasks. To address this, Retrieval-Augmented Generation (RAG) incorporates external document chunks to expand LLM knowledge. Furthermore, compressing information from document chunks through extraction or summarization can improve LLM performance. Nonetheless, LLMs still struggle to notice and utilize scattered key information, a problem known as the "lost-in-the-middle" syndrome. Therefore, we typically need to restructure the content for LLM to recognize the key information. We propose Refiner, an end-to-end extract-and-restructure paradigm that operates in the post-retrieval process of RAG. Refiner leverages a single decoder-only LLM to adaptively extract query-relevant contents verbatim along with the necessary context, and section them based on their interconnectedness, thereby highlights information distinction, and aligns downstream LLMs with the original context effectively. Experiments show that a trained Refiner (with 7B parameters) exhibits significant gain to downstream LLM in improving answer accuracy, and outperforms other state-of-the-art advanced RAG and concurrent compressing approaches in various single-hop and multi-hop QA tasks. Notably, Refiner achieves a 80.5% tokens reduction and a 1.6-7.0% improvement margin in multi-hop tasks compared to the next best solution. Refiner is a plug-and-play solution that can be seamlessly integrated with RAG systems, facilitating its application across diverse open-source frameworks.
Flexible, Model-Agnostic Method for Materials Data Extraction from Text Using General Purpose Language Models
Accurate and comprehensive material databases extracted from research papers are critical for materials science and engineering but require significant human effort to develop. In this paper we present a simple method of extracting materials data from full texts of research papers suitable for quickly developing modest-sized databases. The method requires minimal to no coding, prior knowledge about the extracted property, or model training, and provides high recall and almost perfect precision in the resultant database. The method is fully automated except for one human-assisted step, which typically requires just a few hours of human labor. The method builds on top of natural language processing and large general language models but can work with almost any such model. The language models GPT-3/3.5, bart and DeBERTaV3 are evaluated here for comparison. We provide a detailed detailed analysis of the methods performance in extracting bulk modulus data, obtaining up to 90% precision at 96% recall, depending on the amount of human effort involved. We then demonstrate the methods broader effectiveness by developing a database of critical cooling rates for metallic glasses.
CASPER: Concept-integrated Sparse Representation for Scientific Retrieval
The exponential growth of scientific literature has made it increasingly difficult for researchers to keep up with the literature. In an attempt to alleviate this problem, we propose CASPER, a sparse retrieval model for scientific search that utilizes tokens and keyphrases as representation units (i.e. dimensions in the sparse embedding space), enabling it to represent queries and documents with research concepts and match them at both granular and conceptual levels. To overcome the lack of suitable training data, we propose mining training data by leveraging scholarly references (i.e. signals that capture how research concepts of papers are expressed in different settings), including titles, citation contexts, author-assigned keyphrases, and co-citations. CASPER outperforms strong dense and sparse retrieval baselines on eight scientific retrieval benchmarks. Moreover, we demonstrate that through simple post-processing, CASPER can be effectively used for the keyphrase generation tasks, achieving competitive performance with the established CopyRNN while producing more diverse keyphrases and being nearly four times faster.
Challenges and Considerations in Annotating Legal Data: A Comprehensive Overview
The process of annotating data within the legal sector is filled with distinct challenges that differ from other fields, primarily due to the inherent complexities of legal language and documentation. The initial task usually involves selecting an appropriate raw dataset that captures the intricate aspects of legal texts. Following this, extracting text becomes a complicated task, as legal documents often have complex structures, footnotes, references, and unique terminology. The importance of data cleaning is magnified in this context, ensuring that redundant information is eliminated while maintaining crucial legal details and context. Creating comprehensive yet straightforward annotation guidelines is imperative, as these guidelines serve as the road map for maintaining uniformity and addressing the subtle nuances of legal terminology. Another critical aspect is the involvement of legal professionals in the annotation process. Their expertise is valuable in ensuring that the data not only remains contextually accurate but also adheres to prevailing legal standards and interpretations. This paper provides an expanded view of these challenges and aims to offer a foundational understanding and guidance for researchers and professionals engaged in legal data annotation projects. In addition, we provide links to our created and fine-tuned datasets and language models. These resources are outcomes of our discussed projects and solutions to challenges faced while working on them.
Schema as Parameterized Tools for Universal Information Extraction
Universal information extraction (UIE) primarily employs an extractive generation approach with large language models (LLMs), typically outputting structured information based on predefined schemas such as JSON or tables. UIE suffers from a lack of adaptability when selecting between predefined schemas and on-the-fly schema generation within the in-context learning paradigm, especially when there are numerous schemas to choose from. In this paper, we propose a unified adaptive text-to-structure generation framework, called Schema as Parameterized Tools (SPT), which reimagines the tool-calling capability of LLMs by treating predefined schemas as parameterized tools for tool selection and parameter filling. Specifically, our SPT method can be applied to unify closed, open, and on-demand IE tasks by adopting Schema Retrieval by fetching the relevant schemas from a predefined pool, Schema Filling by extracting information and filling slots as with tool parameters, or Schema Generation by synthesizing new schemas with uncovered cases. Experiments show that the SPT method can handle four distinct IE tasks adaptively, delivering robust schema retrieval and selection performance. SPT also achieves comparable extraction performance to LoRA baselines and current leading UIE systems with significantly fewer trainable parameters.
A general-purpose material property data extraction pipeline from large polymer corpora using Natural Language Processing
The ever-increasing number of materials science articles makes it hard to infer chemistry-structure-property relations from published literature. We used natural language processing (NLP) methods to automatically extract material property data from the abstracts of polymer literature. As a component of our pipeline, we trained MaterialsBERT, a language model, using 2.4 million materials science abstracts, which outperforms other baseline models in three out of five named entity recognition datasets when used as the encoder for text. Using this pipeline, we obtained ~300,000 material property records from ~130,000 abstracts in 60 hours. The extracted data was analyzed for a diverse range of applications such as fuel cells, supercapacitors, and polymer solar cells to recover non-trivial insights. The data extracted through our pipeline is made available through a web platform at https://polymerscholar.org which can be used to locate material property data recorded in abstracts conveniently. This work demonstrates the feasibility of an automatic pipeline that starts from published literature and ends with a complete set of extracted material property information.
SymbioticRAG: Enhancing Document Intelligence Through Human-LLM Symbiotic Collaboration
We present SymbioticRAG, a novel framework that fundamentally reimagines Retrieval-Augmented Generation~(RAG) systems by establishing a bidirectional learning relationship between humans and machines. Our approach addresses two critical challenges in current RAG systems: the inherently human-centered nature of relevance determination and users' progression from "unconscious incompetence" in query formulation. SymbioticRAG introduces a two-tier solution where Level 1 enables direct human curation of retrieved content through interactive source document exploration, while Level 2 aims to build personalized retrieval models based on captured user interactions. We implement Level 1 through three key components: (1)~a comprehensive document processing pipeline with specialized models for layout detection, OCR, and extraction of tables, formulas, and figures; (2)~an extensible retriever module supporting multiple retrieval strategies; and (3)~an interactive interface that facilitates both user engagement and interaction data logging. We experiment Level 2 implementation via a retriever strategy incorporated LLM summarized user intention from user interaction logs. To maintain high-quality data preparation, we develop a human-on-the-loop validation interface that improves pipeline output while advancing research in specialized extraction tasks. Evaluation across three scenarios (literature review, geological exploration, and education) demonstrates significant improvements in retrieval relevance and user satisfaction compared to traditional RAG approaches. To facilitate broader research and further advancement of SymbioticRAG Level 2 implementation, we will make our system openly accessible to the research community.
Extract-0: A Specialized Language Model for Document Information Extraction
This paper presents Extract-0, a 7-billion parameter language model specifically optimized for document information extraction that achieves performance exceeding models with parameter counts several orders of magnitude larger. Through a novel combination of synthetic data generation, supervised fine-tuning with Low-Rank Adaptation (LoRA), and reinforcement learning via Group Relative Policy Optimization (GRPO), Extract-0 achieves a mean reward of 0.573 on a benchmark of 1,000 diverse document extraction tasks, outperforming GPT-4.1 (0.457), o3 (0.464), and GPT-4.1-2025 (0.459). The training methodology employs a memory-preserving synthetic data generation pipeline that produces 280,128 training examples from diverse document sources, followed by parameterefficient fine-tuning that modifies only 0.53% of model weights (40.4M out of 7.66B parameters). The reinforcement learning phase introduces a novel semantic similarity-based reward function that handles the inherent ambiguity in information extraction tasks. This research demonstrates that task-specific optimization can yield models that surpass general-purpose systems while requiring substantially fewer computational resource.
Extractive Summarization via ChatGPT for Faithful Summary Generation
Extractive summarization is a crucial task in natural language processing that aims to condense long documents into shorter versions by directly extracting sentences. The recent introduction of large language models has attracted significant interest in the NLP community due to its remarkable performance on a wide range of downstream tasks. This paper first presents a thorough evaluation of ChatGPT's performance on extractive summarization and compares it with traditional fine-tuning methods on various benchmark datasets. Our experimental analysis reveals that ChatGPT exhibits inferior extractive summarization performance in terms of ROUGE scores compared to existing supervised systems, while achieving higher performance based on LLM-based evaluation metrics. In addition, we explore the effectiveness of in-context learning and chain-of-thought reasoning for enhancing its performance. Furthermore, we find that applying an extract-then-generate pipeline with ChatGPT yields significant performance improvements over abstractive baselines in terms of summary faithfulness. These observations highlight potential directions for enhancing ChatGPT's capabilities in faithful summarization using two-stage approaches.
Design of Negative Sampling Strategies for Distantly Supervised Skill Extraction
Skills play a central role in the job market and many human resources (HR) processes. In the wake of other digital experiences, today's online job market has candidates expecting to see the right opportunities based on their skill set. Similarly, enterprises increasingly need to use data to guarantee that the skills within their workforce remain future-proof. However, structured information about skills is often missing, and processes building on self- or manager-assessment have shown to struggle with issues around adoption, completeness, and freshness of the resulting data. Extracting skills is a highly challenging task, given the many thousands of possible skill labels mentioned either explicitly or merely described implicitly and the lack of finely annotated training corpora. Previous work on skill extraction overly simplifies the task to an explicit entity detection task or builds on manually annotated training data that would be infeasible if applied to a complete vocabulary of skills. We propose an end-to-end system for skill extraction, based on distant supervision through literal matching. We propose and evaluate several negative sampling strategies, tuned on a small validation dataset, to improve the generalization of skill extraction towards implicitly mentioned skills, despite the lack of such implicit skills in the distantly supervised data. We observe that using the ESCO taxonomy to select negative examples from related skills yields the biggest improvements, and combining three different strategies in one model further increases the performance, up to 8 percentage points in RP@5. We introduce a manually annotated evaluation benchmark for skill extraction based on the ESCO taxonomy, on which we validate our models. We release the benchmark dataset for research purposes to stimulate further research on the task.
Large Language Models and Synthetic Data for Monitoring Dataset Mentions in Research Papers
Tracking how data is mentioned and used in research papers provides critical insights for improving data discoverability, quality, and production. However, manually identifying and classifying dataset mentions across vast academic literature is resource-intensive and not scalable. This paper presents a machine learning framework that automates dataset mention detection across research domains by leveraging large language models (LLMs), synthetic data, and a two-stage fine-tuning process. We employ zero-shot extraction from research papers, an LLM-as-a-Judge for quality assessment, and a reasoning agent for refinement to generate a weakly supervised synthetic dataset. The Phi-3.5-mini instruct model is pre-fine-tuned on this dataset, followed by fine-tuning on a manually annotated subset. At inference, a ModernBERT-based classifier efficiently filters dataset mentions, reducing computational overhead while maintaining high recall. Evaluated on a held-out manually annotated sample, our fine-tuned model outperforms NuExtract-v1.5 and GLiNER-large-v2.1 in dataset extraction accuracy. Our results highlight how LLM-generated synthetic data can effectively address training data scarcity, improving generalization in low-resource settings. This framework offers a pathway toward scalable monitoring of dataset usage, enhancing transparency, and supporting researchers, funders, and policymakers in identifying data gaps and strengthening data accessibility for informed decision-making.
Retrieval Augmented Structured Generation: Business Document Information Extraction As Tool Use
Business Document Information Extraction (BDIE) is the problem of transforming a blob of unstructured information (raw text, scanned documents, etc.) into a structured format that downstream systems can parse and use. It has two main tasks: Key-Information Extraction (KIE) and Line Items Recognition (LIR). In this paper, we argue that BDIE is best modeled as a Tool Use problem, where the tools are these downstream systems. We then present Retrieval Augmented Structured Generation (RASG), a novel general framework for BDIE that achieves state of the art (SOTA) results on both KIE and LIR tasks on BDIE benchmarks. The contributions of this paper are threefold: (1) We show, with ablation benchmarks, that Large Language Models (LLMs) with RASG are already competitive with or surpasses current SOTA Large Multimodal Models (LMMs) without RASG on BDIE benchmarks. (2) We propose a new metric class for Line Items Recognition, General Line Items Recognition Metric (GLIRM), that is more aligned with practical BDIE use cases compared to existing metrics, such as ANLS*, DocILE, and GriTS. (3) We provide a heuristic algorithm for backcalculating bounding boxes of predicted line items and tables without the need for vision encoders. Finally, we claim that, while LMMs might sometimes offer marginal performance benefits, LLMs + RASG is oftentimes superior given real-world applications and constraints of BDIE.
`Keep it Together': Enforcing Cohesion in Extractive Summaries by Simulating Human Memory
Extractive summaries are usually presented as lists of sentences with no expected cohesion between them. In this paper, we aim to enforce cohesion whilst controlling for informativeness and redundancy in summaries, in cases where the input exhibits high redundancy. The pipeline controls for redundancy in long inputs as it is consumed, and balances informativeness and cohesion during sentence selection. Our sentence selector simulates human memory to keep track of topics --modeled as lexical chains--, enforcing cohesive ties between noun phrases. Across a variety of domains, our experiments revealed that it is possible to extract highly cohesive summaries that nevertheless read as informative to humans as summaries extracted by only accounting for informativeness or redundancy. The extracted summaries exhibit smooth topic transitions between sentences as signaled by lexical chains, with chains spanning adjacent or near-adjacent sentences.
Patience is all you need! An agentic system for performing scientific literature review
Large language models (LLMs) have grown in their usage to provide support for question answering across numerous disciplines. The models on their own have already shown promise for answering basic questions, however fail quickly where expert domain knowledge is required or the question is nuanced. Scientific research often involves searching for relevant literature, distilling pertinent information from that literature and analysing how the findings support or contradict one another. The information is often encapsulated in the full text body of research articles, rather than just in the abstracts. Statements within these articles frequently require the wider article context to be fully understood. We have built an LLM-based system that performs such search and distillation of information encapsulated in scientific literature, and we evaluate our keyword based search and information distillation system against a set of biology related questions from previously released literature benchmarks. We demonstrate sparse retrieval methods exhibit results close to state of the art without the need for dense retrieval, with its associated infrastructure and complexity overhead. We also show how to increase the coverage of relevant documents for literature review generation.
MultiParaDetox: Extending Text Detoxification with Parallel Data to New Languages
Text detoxification is a textual style transfer (TST) task where a text is paraphrased from a toxic surface form, e.g. featuring rude words, to the neutral register. Recently, text detoxification methods found their applications in various task such as detoxification of Large Language Models (LLMs) (Leong et al., 2023; He et al., 2024; Tang et al., 2023) and toxic speech combating in social networks (Deng et al., 2023; Mun et al., 2023; Agarwal et al., 2023). All these applications are extremely important to ensure safe communication in modern digital worlds. However, the previous approaches for parallel text detoxification corpora collection -- ParaDetox (Logacheva et al., 2022) and APPADIA (Atwell et al., 2022) -- were explored only in monolingual setup. In this work, we aim to extend ParaDetox pipeline to multiple languages presenting MultiParaDetox to automate parallel detoxification corpus collection for potentially any language. Then, we experiment with different text detoxification models -- from unsupervised baselines to LLMs and fine-tuned models on the presented parallel corpora -- showing the great benefit of parallel corpus presence to obtain state-of-the-art text detoxification models for any language.
CaBaGe: Data-Free Model Extraction using ClAss BAlanced Generator Ensemble
Machine Learning as a Service (MLaaS) is often provided as a pay-per-query, black-box system to clients. Such a black-box approach not only hinders open replication, validation, and interpretation of model results, but also makes it harder for white-hat researchers to identify vulnerabilities in the MLaaS systems. Model extraction is a promising technique to address these challenges by reverse-engineering black-box models. Since training data is typically unavailable for MLaaS models, this paper focuses on the realistic version of it: data-free model extraction. We propose a data-free model extraction approach, CaBaGe, to achieve higher model extraction accuracy with a small number of queries. Our innovations include (1) a novel experience replay for focusing on difficult training samples; (2) an ensemble of generators for steadily producing diverse synthetic data; and (3) a selective filtering process for querying the victim model with harder, more balanced samples. In addition, we create a more realistic setting, for the first time, where the attacker has no knowledge of the number of classes in the victim training data, and create a solution to learn the number of classes on the fly. Our evaluation shows that CaBaGe outperforms existing techniques on seven datasets -- MNIST, FMNIST, SVHN, CIFAR-10, CIFAR-100, ImageNet-subset, and Tiny ImageNet -- with an accuracy improvement of the extracted models by up to 43.13%. Furthermore, the number of queries required to extract a clone model matching the final accuracy of prior work is reduced by up to 75.7%.
Scalable Extraction of Training Data from (Production) Language Models
This paper studies extractable memorization: training data that an adversary can efficiently extract by querying a machine learning model without prior knowledge of the training dataset. We show an adversary can extract gigabytes of training data from open-source language models like Pythia or GPT-Neo, semi-open models like LLaMA or Falcon, and closed models like ChatGPT. Existing techniques from the literature suffice to attack unaligned models; in order to attack the aligned ChatGPT, we develop a new divergence attack that causes the model to diverge from its chatbot-style generations and emit training data at a rate 150x higher than when behaving properly. Our methods show practical attacks can recover far more data than previously thought, and reveal that current alignment techniques do not eliminate memorization.
MOLE: Metadata Extraction and Validation in Scientific Papers Using LLMs
Metadata extraction is essential for cataloging and preserving datasets, enabling effective research discovery and reproducibility, especially given the current exponential growth in scientific research. While Masader (Alyafeai et al.,2021) laid the groundwork for extracting a wide range of metadata attributes from Arabic NLP datasets' scholarly articles, it relies heavily on manual annotation. In this paper, we present MOLE, a framework that leverages Large Language Models (LLMs) to automatically extract metadata attributes from scientific papers covering datasets of languages other than Arabic. Our schema-driven methodology processes entire documents across multiple input formats and incorporates robust validation mechanisms for consistent output. Additionally, we introduce a new benchmark to evaluate the research progress on this task. Through systematic analysis of context length, few-shot learning, and web browsing integration, we demonstrate that modern LLMs show promising results in automating this task, highlighting the need for further future work improvements to ensure consistent and reliable performance. We release the code: https://github.com/IVUL-KAUST/MOLE and dataset: https://huggingface.co/datasets/IVUL-KAUST/MOLE for the research community.
A Reproducible Extraction of Training Images from Diffusion Models
Recently, Carlini et al. demonstrated the widely used model Stable Diffusion can regurgitate real training samples, which is troublesome from a copyright perspective. In this work, we provide an efficient extraction attack on par with the recent attack, with several order of magnitudes less network evaluations. In the process, we expose a new phenomena, which we dub template verbatims, wherein a diffusion model will regurgitate a training sample largely in tact. Template verbatims are harder to detect as they require retrieval and masking to correctly label. Furthermore, they are still generated by newer systems, even those which de-duplicate their training set, and we give insight into why they still appear during generation. We extract training images from several state of the art systems, including Stable Diffusion 2.0, Deep Image Floyd, and finally Midjourney v4. We release code to verify our extraction attack, perform the attack, as well as all extracted prompts at https://github.com/ryanwebster90/onestep-extraction.
LitLLMs, LLMs for Literature Review: Are we there yet?
Literature reviews are an essential component of scientific research, but they remain time-intensive and challenging to write, especially due to the recent influx of research papers. This paper explores the zero-shot abilities of recent Large Language Models (LLMs) in assisting with the writing of literature reviews based on an abstract. We decompose the task into two components: 1. Retrieving related works given a query abstract, and 2. Writing a literature review based on the retrieved results. We analyze how effective LLMs are for both components. For retrieval, we introduce a novel two-step search strategy that first uses an LLM to extract meaningful keywords from the abstract of a paper and then retrieves potentially relevant papers by querying an external knowledge base. Additionally, we study a prompting-based re-ranking mechanism with attribution and show that re-ranking doubles the normalized recall compared to naive search methods, while providing insights into the LLM's decision-making process. In the generation phase, we propose a two-step approach that first outlines a plan for the review and then executes steps in the plan to generate the actual review. To evaluate different LLM-based literature review methods, we create test sets from arXiv papers using a protocol designed for rolling use with newly released LLMs to avoid test set contamination in zero-shot evaluations. We release this evaluation protocol to promote additional research and development in this regard. Our empirical results suggest that LLMs show promising potential for writing literature reviews when the task is decomposed into smaller components of retrieval and planning. Our project page including a demonstration system and toolkit can be accessed here: https://litllm.github.io.
LaMSUM: Creating Extractive Summaries of User Generated Content using LLMs
Large Language Models (LLMs) have demonstrated impressive performance across a wide range of NLP tasks, including summarization. LLMs inherently produce abstractive summaries by paraphrasing the original text, while the generation of extractive summaries - selecting specific subsets from the original text - remains largely unexplored. LLMs have a limited context window size, restricting the amount of data that can be processed at once. We tackle this challenge by introducing LaMSUM, a novel multi-level framework designed to generate extractive summaries from large collections of user-generated text using LLMs. LaMSUM integrates summarization with different voting methods to achieve robust summaries. Extensive evaluation using four popular LLMs (Llama 3, Mixtral, Gemini, GPT-4o) demonstrates that LaMSUM outperforms state-of-the-art extractive summarization methods. Overall, this work represents one of the first attempts to achieve extractive summarization by leveraging the power of LLMs, and is likely to spark further interest within the research community.
Methods for Detoxification of Texts for the Russian Language
We introduce the first study of automatic detoxification of Russian texts to combat offensive language. Such a kind of textual style transfer can be used, for instance, for processing toxic content in social media. While much work has been done for the English language in this field, it has never been solved for the Russian language yet. We test two types of models - unsupervised approach based on BERT architecture that performs local corrections and supervised approach based on pretrained language GPT-2 model - and compare them with several baselines. In addition, we describe evaluation setup providing training datasets and metrics for automatic evaluation. The results show that the tested approaches can be successfully used for detoxification, although there is room for improvement.
Construction of English Resume Corpus and Test with Pre-trained Language Models
Information extraction(IE) has always been one of the essential tasks of NLP. Moreover, one of the most critical application scenarios of information extraction is the information extraction of resumes. Constructed text is obtained by classifying each part of the resume. It is convenient to store these texts for later search and analysis. Furthermore, the constructed resume data can also be used in the AI resume screening system. Significantly reduce the labor cost of HR. This study aims to transform the information extraction task of resumes into a simple sentence classification task. Based on the English resume dataset produced by the prior study. The classification rules are improved to create a larger and more fine-grained classification dataset of resumes. This corpus is also used to test some current mainstream Pre-training language models (PLMs) performance.Furthermore, in order to explore the relationship between the number of training samples and the correctness rate of the resume dataset, we also performed comparison experiments with training sets of different train set sizes.The final multiple experimental results show that the resume dataset with improved annotation rules and increased sample size of the dataset improves the accuracy of the original resume dataset.
Zero-Indexing Internet Search Augmented Generation for Large Language Models
Retrieval augmented generation has emerged as an effective method to enhance large language model performance. This approach typically relies on an internal retrieval module that uses various indexing mechanisms to manage a static pre-processed corpus. However, such a paradigm often falls short when it is necessary to integrate the most up-to-date information that has not been updated into the corpus during generative inference time. In this paper, we explore an alternative approach that leverages standard search engine APIs to dynamically integrate the latest online information (without maintaining any index for any fixed corpus), thereby improving the quality of generated content. We design a collaborative LLM-based paradigm, where we include: (i) a parser-LLM that determines if the Internet augmented generation is demanded and extracts the search keywords if so with a single inference; (ii) a mixed ranking strategy that re-ranks the retrieved HTML files to eliminate bias introduced from the search engine API; and (iii) an extractor-LLM that can accurately and efficiently extract relevant information from the fresh content in each HTML file. We conduct extensive empirical studies to evaluate the performance of this Internet search augmented generation paradigm. The experimental results demonstrate that our method generates content with significantly improved quality. Our system has been successfully deployed in a production environment to serve 01.AI's generative inference requests.
NNOSE: Nearest Neighbor Occupational Skill Extraction
The labor market is changing rapidly, prompting increased interest in the automatic extraction of occupational skills from text. With the advent of English benchmark job description datasets, there is a need for systems that handle their diversity well. We tackle the complexity in occupational skill datasets tasks -- combining and leveraging multiple datasets for skill extraction, to identify rarely observed skills within a dataset, and overcoming the scarcity of skills across datasets. In particular, we investigate the retrieval-augmentation of language models, employing an external datastore for retrieving similar skills in a dataset-unifying manner. Our proposed method, Nearest Neighbor Occupational Skill Extraction (NNOSE) effectively leverages multiple datasets by retrieving neighboring skills from other datasets in the datastore. This improves skill extraction without additional fine-tuning. Crucially, we observe a performance gain in predicting infrequent patterns, with substantial gains of up to 30\% span-F1 in cross-dataset settings.
Unveiling Document Structures with YOLOv5 Layout Detection
The current digital environment is characterized by the widespread presence of data, particularly unstructured data, which poses many issues in sectors including finance, healthcare, and education. Conventional techniques for data extraction encounter difficulties in dealing with the inherent variety and complexity of unstructured data, hence requiring the adoption of more efficient methodologies. This research investigates the utilization of YOLOv5, a cutting-edge computer vision model, for the purpose of rapidly identifying document layouts and extracting unstructured data. The present study establishes a conceptual framework for delineating the notion of "objects" as they pertain to documents, incorporating various elements such as paragraphs, tables, photos, and other constituent parts. The main objective is to create an autonomous system that can effectively recognize document layouts and extract unstructured data, hence improving the effectiveness of data extraction. In the conducted examination, the YOLOv5 model exhibits notable effectiveness in the task of document layout identification, attaining a high accuracy rate along with a precision value of 0.91, a recall value of 0.971, an F1-score of 0.939, and an area under the receiver operating characteristic curve (AUC-ROC) of 0.975. The remarkable performance of this system optimizes the process of extracting textual and tabular data from document images. Its prospective applications are not limited to document analysis but can encompass unstructured data from diverse sources, such as audio data. This study lays the foundation for future investigations into the wider applicability of YOLOv5 in managing various types of unstructured data, offering potential for novel applications across multiple domains.
Keyword Extraction from Short Texts with a Text-To-Text Transfer Transformer
The paper explores the relevance of the Text-To-Text Transfer Transformer language model (T5) for Polish (plT5) to the task of intrinsic and extrinsic keyword extraction from short text passages. The evaluation is carried out on the new Polish Open Science Metadata Corpus (POSMAC), which is released with this paper: a collection of 216,214 abstracts of scientific publications compiled in the CURLICAT project. We compare the results obtained by four different methods, i.e. plT5kw, extremeText, TermoPL, KeyBERT and conclude that the plT5kw model yields particularly promising results for both frequent and sparsely represented keywords. Furthermore, a plT5kw keyword generation model trained on the POSMAC also seems to produce highly useful results in cross-domain text labelling scenarios. We discuss the performance of the model on news stories and phone-based dialog transcripts which represent text genres and domains extrinsic to the dataset of scientific abstracts. Finally, we also attempt to characterize the challenges of evaluating a text-to-text model on both intrinsic and extrinsic keyword extraction.
Asteroid: the PyTorch-based audio source separation toolkit for researchers
This paper describes Asteroid, the PyTorch-based audio source separation toolkit for researchers. Inspired by the most successful neural source separation systems, it provides all neural building blocks required to build such a system. To improve reproducibility, Kaldi-style recipes on common audio source separation datasets are also provided. This paper describes the software architecture of Asteroid and its most important features. By showing experimental results obtained with Asteroid's recipes, we show that our implementations are at least on par with most results reported in reference papers. The toolkit is publicly available at https://github.com/mpariente/asteroid .
Chem-FINESE: Validating Fine-Grained Few-shot Entity Extraction through Text Reconstruction
Fine-grained few-shot entity extraction in the chemical domain faces two unique challenges. First, compared with entity extraction tasks in the general domain, sentences from chemical papers usually contain more entities. Moreover, entity extraction models usually have difficulty extracting entities of long-tailed types. In this paper, we propose Chem-FINESE, a novel sequence-to-sequence (seq2seq) based few-shot entity extraction approach, to address these two challenges. Our Chem-FINESE has two components: a seq2seq entity extractor to extract named entities from the input sentence and a seq2seq self-validation module to reconstruct the original input sentence from extracted entities. Inspired by the fact that a good entity extraction system needs to extract entities faithfully, our new self-validation module leverages entity extraction results to reconstruct the original input sentence. Besides, we design a new contrastive loss to reduce excessive copying during the extraction process. Finally, we release ChemNER+, a new fine-grained chemical entity extraction dataset that is annotated by domain experts with the ChemNER schema. Experiments in few-shot settings with both ChemNER+ and CHEMET datasets show that our newly proposed framework has contributed up to 8.26% and 6.84% absolute F1-score gains respectively.
Supervised Topical Key Phrase Extraction of News Stories using Crowdsourcing, Light Filtering and Co-reference Normalization
Fast and effective automated indexing is critical for search and personalized services. Key phrases that consist of one or more words and represent the main concepts of the document are often used for the purpose of indexing. In this paper, we investigate the use of additional semantic features and pre-processing steps to improve automatic key phrase extraction. These features include the use of signal words and freebase categories. Some of these features lead to significant improvements in the accuracy of the results. We also experimented with 2 forms of document pre-processing that we call light filtering and co-reference normalization. Light filtering removes sentences from the document, which are judged peripheral to its main content. Co-reference normalization unifies several written forms of the same named entity into a unique form. We also needed a "Gold Standard" - a set of labeled documents for training and evaluation. While the subjective nature of key phrase selection precludes a true "Gold Standard", we used Amazon's Mechanical Turk service to obtain a useful approximation. Our data indicates that the biggest improvements in performance were due to shallow semantic features, news categories, and rhetorical signals (nDCG 78.47% vs. 68.93%). The inclusion of deeper semantic features such as Freebase sub-categories was not beneficial by itself, but in combination with pre-processing, did cause slight improvements in the nDCG scores.
Multilingual and Explainable Text Detoxification with Parallel Corpora
Even with various regulations in place across countries and social media platforms (Government of India, 2021; European Parliament and Council of the European Union, 2022, digital abusive speech remains a significant issue. One potential approach to address this challenge is automatic text detoxification, a text style transfer (TST) approach that transforms toxic language into a more neutral or non-toxic form. To date, the availability of parallel corpora for the text detoxification task (Logachevavet al., 2022; Atwell et al., 2022; Dementievavet al., 2024a) has proven to be crucial for state-of-the-art approaches. With this work, we extend parallel text detoxification corpus to new languages -- German, Chinese, Arabic, Hindi, and Amharic -- testing in the extensive multilingual setup TST baselines. Next, we conduct the first of its kind an automated, explainable analysis of the descriptive features of both toxic and non-toxic sentences, diving deeply into the nuances, similarities, and differences of toxicity and detoxification across 9 languages. Finally, based on the obtained insights, we experiment with a novel text detoxification method inspired by the Chain-of-Thoughts reasoning approach, enhancing the prompting process through clustering on relevant descriptive attributes.
Like an Open Book? Read Neural Network Architecture with Simple Power Analysis on 32-bit Microcontrollers
Model extraction is a growing concern for the security of AI systems. For deep neural network models, the architecture is the most important information an adversary aims to recover. Being a sequence of repeated computation blocks, neural network models deployed on edge-devices will generate distinctive side-channel leakages. The latter can be exploited to extract critical information when targeted platforms are physically accessible. By combining theoretical knowledge about deep learning practices and analysis of a widespread implementation library (ARM CMSIS-NN), our purpose is to answer this critical question: how far can we extract architecture information by simply examining an EM side-channel trace? For the first time, we propose an extraction methodology for traditional MLP and CNN models running on a high-end 32-bit microcontroller (Cortex-M7) that relies only on simple pattern recognition analysis. Despite few challenging cases, we claim that, contrary to parameters extraction, the complexity of the attack is relatively low and we highlight the urgent need for practicable protections that could fit the strong memory and latency requirements of such platforms.
Mention Extraction and Linking for SQL Query Generation
On the WikiSQL benchmark, state-of-the-art text-to-SQL systems typically take a slot-filling approach by building several dedicated models for each type of slots. Such modularized systems are not only complex butalso of limited capacity for capturing inter-dependencies among SQL clauses. To solve these problems, this paper proposes a novel extraction-linking approach, where a unified extractor recognizes all types of slot mentions appearing in the question sentence before a linker maps the recognized columns to the table schema to generate executable SQL queries. Trained with automatically generated annotations, the proposed method achieves the first place on the WikiSQL benchmark.
Characterizing Prompt Compression Methods for Long Context Inference
Long context inference presents challenges at the system level with increased compute and memory requirements, as well as from an accuracy perspective in being able to reason over long contexts. Recently, several methods have been proposed to compress the prompt to reduce the context length. However, there has been little work on comparing the different proposed methods across different tasks through a standardized analysis. This has led to conflicting results. To address this, here we perform a comprehensive characterization and evaluation of different prompt compression methods. In particular, we analyze extractive compression, summarization-based abstractive compression, and token pruning methods. Surprisingly, we find that extractive compression often outperforms all the other approaches, and enables up to 10x compression with minimal accuracy degradation. Interestingly, we also find that despite several recent claims, token pruning methods often lag behind extractive compression. We only found marginal improvements on summarization tasks.
InstructIE: A Chinese Instruction-based Information Extraction Dataset
We introduce a new Information Extraction (IE) task dubbed Instruction-based IE, which aims to ask the system to follow specific instructions or guidelines to extract information. To facilitate research in this area, we construct a dataset called InstructIE, consisting of 270,000 weakly supervised data from Chinese Wikipedia and 1,000 high-quality crowdsourced annotated instances. We further evaluate the performance of various baseline models on the InstructIE dataset. The results reveal that although current models exhibit promising performance, there is still room for improvement. Furthermore, we conduct a comprehensive case study analysis, underlining the challenges inherent in the Instruction-based IE task. Code and dataset are available at https://github.com/zjunlp/DeepKE/tree/main/example/llm.
Adaptive Reinforcement Learning Planning: Harnessing Large Language Models for Complex Information Extraction
Existing research on large language models (LLMs) shows that they can solve information extraction tasks through multi-step planning. However, their extraction behavior on complex sentences and tasks is unstable, emerging issues such as false positives and missing elements. We observe that decomposing complex extraction tasks and extracting them step by step can effectively improve LLMs' performance, and the extraction orders of entities significantly affect the final results of LLMs. This paper proposes a two-stage multi-step method for LLM-based information extraction and adopts the RL framework to execute the multi-step planning. We regard sequential extraction as a Markov decision process, build an LLM-based extraction environment, design a decision module to adaptively provide the optimal order for sequential entity extraction on different sentences, and utilize the DDQN algorithm to train the decision model. We also design the rewards and evaluation metrics suitable for the extraction results of LLMs. We conduct extensive experiments on multiple public datasets to demonstrate the effectiveness of our method in improving the information extraction capabilities of LLMs.
Key-value information extraction from full handwritten pages
We propose a Transformer-based approach for information extraction from digitized handwritten documents. Our approach combines, in a single model, the different steps that were so far performed by separate models: feature extraction, handwriting recognition and named entity recognition. We compare this integrated approach with traditional two-stage methods that perform handwriting recognition before named entity recognition, and present results at different levels: line, paragraph, and page. Our experiments show that attention-based models are especially interesting when applied on full pages, as they do not require any prior segmentation step. Finally, we show that they are able to learn from key-value annotations: a list of important words with their corresponding named entities. We compare our models to state-of-the-art methods on three public databases (IAM, ESPOSALLES, and POPP) and outperform previous performances on all three datasets.
Prompt me a Dataset: An investigation of text-image prompting for historical image dataset creation using foundation models
In this paper, we present a pipeline for image extraction from historical documents using foundation models, and evaluate text-image prompts and their effectiveness on humanities datasets of varying levels of complexity. The motivation for this approach stems from the high interest of historians in visual elements printed alongside historical texts on the one hand, and from the relative lack of well-annotated datasets within the humanities when compared to other domains. We propose a sequential approach that relies on GroundDINO and Meta's Segment-Anything-Model (SAM) to retrieve a significant portion of visual data from historical documents that can then be used for downstream development tasks and dataset creation, as well as evaluate the effect of different linguistic prompts on the resulting detections.
CX DB8: A queryable extractive summarizer and semantic search engine
Competitive Debate's increasingly technical nature has left competitors looking for tools to accelerate evidence production. We find that the unique type of extractive summarization performed by competitive debaters - summarization with a bias towards a particular target meaning - can be performed using the latest innovations in unsupervised pre-trained text vectorization models. We introduce CX_DB8, a queryable word-level extractive summarizer and evidence creation framework, which allows for rapid, biasable summarization of arbitarily sized texts. CX_DB8s usage of the embedding framework Flair means that as the underlying models improve, CX_DB8 will also improve. We observe that CX_DB8 also functions as a semantic search engine, and has application as a supplement to traditional "find" functionality in programs and webpages. CX_DB8 is currently used by competitive debaters and is made available to the public at https://github.com/Hellisotherpeople/CX_DB8
LexRank: Graph-based Lexical Centrality as Salience in Text Summarization
We introduce a stochastic graph-based method for computing relative importance of textual units for Natural Language Processing. We test the technique on the problem of Text Summarization (TS). Extractive TS relies on the concept of sentence salience to identify the most important sentences in a document or set of documents. Salience is typically defined in terms of the presence of particular important words or in terms of similarity to a centroid pseudo-sentence. We consider a new approach, LexRank, for computing sentence importance based on the concept of eigenvector centrality in a graph representation of sentences. In this model, a connectivity matrix based on intra-sentence cosine similarity is used as the adjacency matrix of the graph representation of sentences. Our system, based on LexRank ranked in first place in more than one task in the recent DUC 2004 evaluation. In this paper we present a detailed analysis of our approach and apply it to a larger data set including data from earlier DUC evaluations. We discuss several methods to compute centrality using the similarity graph. The results show that degree-based methods (including LexRank) outperform both centroid-based methods and other systems participating in DUC in most of the cases. Furthermore, the LexRank with threshold method outperforms the other degree-based techniques including continuous LexRank. We also show that our approach is quite insensitive to the noise in the data that may result from an imperfect topical clustering of documents.
Éclair -- Extracting Content and Layout with Integrated Reading Order for Documents
Optical Character Recognition (OCR) technology is widely used to extract text from images of documents, facilitating efficient digitization and data retrieval. However, merely extracting text is insufficient when dealing with complex documents. Fully comprehending such documents requires an understanding of their structure -- including formatting, formulas, tables, and the reading order of multiple blocks and columns across multiple pages -- as well as semantic information for detecting elements like footnotes and image captions. This comprehensive understanding is crucial for downstream tasks such as retrieval, document question answering, and data curation for training Large Language Models (LLMs) and Vision Language Models (VLMs). To address this, we introduce \'Eclair, a general-purpose text-extraction tool specifically designed to process a wide range of document types. Given an image, \'Eclair is able to extract formatted text in reading order, along with bounding boxes and their corresponding semantic classes. To thoroughly evaluate these novel capabilities, we introduce our diverse human-annotated benchmark for document-level OCR and semantic classification. \'Eclair achieves state-of-the-art accuracy on this benchmark, outperforming other methods across key metrics. Additionally, we evaluate \'Eclair on established benchmarks, demonstrating its versatility and strength across several evaluation standards.
From Cloze to Comprehension: Retrofitting Pre-trained Masked Language Model to Pre-trained Machine Reader
We present Pre-trained Machine Reader (PMR), a novel method for retrofitting pre-trained masked language models (MLMs) to pre-trained machine reading comprehension (MRC) models without acquiring labeled data. PMR can resolve the discrepancy between model pre-training and downstream fine-tuning of existing MLMs. To build the proposed PMR, we constructed a large volume of general-purpose and high-quality MRC-style training data by using Wikipedia hyperlinks and designed a Wiki Anchor Extraction task to guide the MRC-style pre-training. Apart from its simplicity, PMR effectively solves extraction tasks, such as Extractive Question Answering and Named Entity Recognition. PMR shows tremendous improvements over existing approaches, especially in low-resource scenarios. When applied to the sequence classification task in the MRC formulation, PMR enables the extraction of high-quality rationales to explain the classification process, thereby providing greater prediction explainability. PMR also has the potential to serve as a unified model for tackling various extraction and classification tasks in the MRC formulation.
EXIT: Context-Aware Extractive Compression for Enhancing Retrieval-Augmented Generation
We introduce EXIT, an extractive context compression framework that enhances both the effectiveness and efficiency of retrieval-augmented generation (RAG) in question answering (QA). Current RAG systems often struggle when retrieval models fail to rank the most relevant documents, leading to the inclusion of more context at the expense of latency and accuracy. While abstractive compression methods can drastically reduce token counts, their token-by-token generation process significantly increases end-to-end latency. Conversely, existing extractive methods reduce latency but rely on independent, non-adaptive sentence selection, failing to fully utilize contextual information. EXIT addresses these limitations by classifying sentences from retrieved documents - while preserving their contextual dependencies - enabling parallelizable, context-aware extraction that adapts to query complexity and retrieval quality. Our evaluations on both single-hop and multi-hop QA tasks show that EXIT consistently surpasses existing compression methods and even uncompressed baselines in QA accuracy, while also delivering substantial reductions in inference time and token count. By improving both effectiveness and efficiency, EXIT provides a promising direction for developing scalable, high-quality QA solutions in RAG pipelines. Our code is available at https://github.com/ThisIsHwang/EXIT
Entity Disambiguation with Entity Definitions
Local models have recently attained astounding performances in Entity Disambiguation (ED), with generative and extractive formulations being the most promising research directions. However, previous works limited their studies to using, as the textual representation of each candidate, only its Wikipedia title. Although certainly effective, this strategy presents a few critical issues, especially when titles are not sufficiently informative or distinguishable from one another. In this paper, we address this limitation and investigate to what extent more expressive textual representations can mitigate it. We thoroughly evaluate our approach against standard benchmarks in ED and find extractive formulations to be particularly well-suited to these representations: we report a new state of the art on 2 out of 6 benchmarks we consider and strongly improve the generalization capability over unseen patterns. We release our code, data and model checkpoints at https://github.com/SapienzaNLP/extend.
Learning to Extract Rational Evidence via Reinforcement Learning for Retrieval-Augmented Generation
Retrieval-Augmented Generation (RAG) effectively improves the accuracy of Large Language Models (LLMs). However, retrieval noises significantly impact the quality of LLMs' generation, necessitating the development of denoising mechanisms. Previous methods extract evidence straightforwardly without explicit thinking, which risks filtering out key clues and struggles with generalization. To this end, we propose EviOmni, which learns to extract rational evidence by (1) explicitly reasoning to identify potential cues within retrieval contents first, and then (2) consciously extracting to avoid omitting any key cues helpful for answering questions. Specifically, we frame evidence reasoning and evidence extraction into one unified response for end-to-end training; apply knowledge token masks for disentanglement to derive reasoning-based and extraction-based answers; and devise three types of verifiable reward functions, including answer, length, and format, to update the model via the policy optimization algorithm. Extensive experiments on three benchmark datasets show the effectiveness of EviOmni, providing compact and high-quality evidence, improving the accuracy of downstream tasks, and promoting effective application in online RAG systems.
PET: An Annotated Dataset for Process Extraction from Natural Language Text
Process extraction from text is an important task of process discovery, for which various approaches have been developed in recent years. However, in contrast to other information extraction tasks, there is a lack of gold-standard corpora of business process descriptions that are carefully annotated with all the entities and relationships of interest. Due to this, it is currently hard to compare the results obtained by extraction approaches in an objective manner, whereas the lack of annotated texts also prevents the application of data-driven information extraction methodologies, typical of the natural language processing field. Therefore, to bridge this gap, we present the PET dataset, a first corpus of business process descriptions annotated with activities, gateways, actors, and flow information. We present our new resource, including a variety of baselines to benchmark the difficulty and challenges of business process extraction from text. PET can be accessed via huggingface.co/datasets/patriziobellan/PET
Large Language Models for Scientific Information Extraction: An Empirical Study for Virology
In this paper, we champion the use of structured and semantic content representation of discourse-based scholarly communication, inspired by tools like Wikipedia infoboxes or structured Amazon product descriptions. These representations provide users with a concise overview, aiding scientists in navigating the dense academic landscape. Our novel automated approach leverages the robust text generation capabilities of LLMs to produce structured scholarly contribution summaries, offering both a practical solution and insights into LLMs' emergent abilities. For LLMs, the prime focus is on improving their general intelligence as conversational agents. We argue that these models can also be applied effectively in information extraction (IE), specifically in complex IE tasks within terse domains like Science. This paradigm shift replaces the traditional modular, pipelined machine learning approach with a simpler objective expressed through instructions. Our results show that finetuned FLAN-T5 with 1000x fewer parameters than the state-of-the-art GPT-davinci is competitive for the task.
An Interdisciplinary Comparison of Sequence Modeling Methods for Next-Element Prediction
Data of sequential nature arise in many application domains in forms of, e.g. textual data, DNA sequences, and software execution traces. Different research disciplines have developed methods to learn sequence models from such datasets: (i) in the machine learning field methods such as (hidden) Markov models and recurrent neural networks have been developed and successfully applied to a wide-range of tasks, (ii) in process mining process discovery techniques aim to generate human-interpretable descriptive models, and (iii) in the grammar inference field the focus is on finding descriptive models in the form of formal grammars. Despite their different focuses, these fields share a common goal - learning a model that accurately describes the behavior in the underlying data. Those sequence models are generative, i.e, they can predict what elements are likely to occur after a given unfinished sequence. So far, these fields have developed mainly in isolation from each other and no comparison exists. This paper presents an interdisciplinary experimental evaluation that compares sequence modeling techniques on the task of next-element prediction on four real-life sequence datasets. The results indicate that machine learning techniques that generally have no aim at interpretability in terms of accuracy outperform techniques from the process mining and grammar inference fields that aim to yield interpretable models.
Zero-shot Triplet Extraction by Template Infilling
The task of triplet extraction aims to extract pairs of entities and their corresponding relations from unstructured text. Most existing methods train an extraction model on training data involving specific target relations, and are incapable of extracting new relations that were not observed at training time. Generalizing the model to unseen relations typically requires fine-tuning on synthetic training data which is often noisy and unreliable. We show that by reducing triplet extraction to a template infilling task over a pre-trained language model (LM), we can equip the extraction model with zero-shot learning capabilities and eliminate the need for additional training data. We propose a novel framework, ZETT (ZEro-shot Triplet extraction by Template infilling), that aligns the task objective to the pre-training objective of generative transformers to generalize to unseen relations. Experiments on FewRel and Wiki-ZSL datasets demonstrate that ZETT shows consistent and stable performance, outperforming previous state-of-the-art methods, even when using automatically generated templates. https://github.com/megagonlabs/zett/
Challenges in Data-to-Document Generation
Recent neural models have shown significant progress on the problem of generating short descriptive texts conditioned on a small number of database records. In this work, we suggest a slightly more difficult data-to-text generation task, and investigate how effective current approaches are on this task. In particular, we introduce a new, large-scale corpus of data records paired with descriptive documents, propose a series of extractive evaluation methods for analyzing performance, and obtain baseline results using current neural generation methods. Experiments show that these models produce fluent text, but fail to convincingly approximate human-generated documents. Moreover, even templated baselines exceed the performance of these neural models on some metrics, though copy- and reconstruction-based extensions lead to noticeable improvements.
Making the Most of your Model: Methods for Finetuning and Applying Pretrained Transformers
This thesis provides methods and analysis of models which make progress on this goal. The techniques outlined are task agnostic, and should provide benefit when used with nearly any transformer LM. We introduce two new finetuning methods which add new capabilities to the models they are used on. The first adds a recurrence mechanism, which removes the fixed-window sized constraint and improves the efficiency of a transformer decoder. The second allows masked language models (MLMs) to be used for initialization of both the encoder and decoder of a non-autoregressive sequence-to-sequence transformer, opening up generative applications of models which were previously only used for natural language understanding tasks. We also introduce two new techniques for improving the quality of predictions of any transformer decoder without additional finetuning. One, hidden state optimization, can be applied to any transformer decoder to improve the quality of predictions at inference time, especially for few-shot classification. The other, conditional beam search, allows practitioners to search for natural language generation (NLG) model outputs with high likelihood while conditioning on the event that the output is not degenerate (e.g. empty, repetitive, etc.). Finally, we provide theoretical and empirical insights on the divergence of model-likelihood and output quality which has widely been observed in prior work. These insights apply to any model which represents a distribution over text, and apply to language models which are not transformers or even autoregressive. We argue that the NLP community has, to some extent, misunderstood the implications of these findings, and encourage a point of view which has more nuance.
A Hybrid Approach to Information Retrieval and Answer Generation for Regulatory Texts
Regulatory texts are inherently long and complex, presenting significant challenges for information retrieval systems in supporting regulatory officers with compliance tasks. This paper introduces a hybrid information retrieval system that combines lexical and semantic search techniques to extract relevant information from large regulatory corpora. The system integrates a fine-tuned sentence transformer model with the traditional BM25 algorithm to achieve both semantic precision and lexical coverage. To generate accurate and comprehensive responses, retrieved passages are synthesized using Large Language Models (LLMs) within a Retrieval Augmented Generation (RAG) framework. Experimental results demonstrate that the hybrid system significantly outperforms standalone lexical and semantic approaches, with notable improvements in Recall@10 and MAP@10. By openly sharing our fine-tuned model and methodology, we aim to advance the development of robust natural language processing tools for compliance-driven applications in regulatory domains.
Improving reference mining in patents with BERT
In this paper we address the challenge of extracting scientific references from patents. We approach the problem as a sequence labelling task and investigate the merits of BERT models to the extraction of these long sequences. References in patents to scientific literature are relevant to study the connection between science and industry. Most prior work only uses the front-page citations for this analysis, which are provided in the metadata of patent archives. In this paper we build on prior work using Conditional Random Fields (CRF) and Flair for reference extraction. We improve the quality of the training data and train three BERT-based models on the labelled data (BERT, bioBERT, sciBERT). We find that the improved training data leads to a large improvement in the quality of the trained models. In addition, the BERT models beat CRF and Flair, with recall scores around 97% obtained with cross validation. With the best model we label a large collection of 33 thousand patents, extract the citations, and match them to publications in the Web of Science database. We extract 50% more references than with the old training data and methods: 735 thousand references in total. With these patent-publication links, follow-up research will further analyze which types of scientific work lead to inventions.
CodeIE: Large Code Generation Models are Better Few-Shot Information Extractors
Large language models (LLMs) pre-trained on massive corpora have demonstrated impressive few-shot learning ability on many NLP tasks. A common practice is to recast the task into a text-to-text format such that generative LLMs of natural language (NL-LLMs) like GPT-3 can be prompted to solve it. However, it is nontrivial to perform information extraction (IE) tasks with NL-LLMs since the output of the IE task is usually structured and therefore is hard to be converted into plain text. In this paper, we propose to recast the structured output in the form of code instead of natural language and utilize generative LLMs of code (Code-LLMs) such as Codex to perform IE tasks, in particular, named entity recognition and relation extraction. In contrast to NL-LLMs, we show that Code-LLMs can be well-aligned with these IE tasks by designing code-style prompts and formulating these IE tasks as code generation tasks. Experiment results on seven benchmarks show that our method consistently outperforms fine-tuning moderate-size pre-trained models specially designed for IE tasks (e.g., UIE) and prompting NL-LLMs under few-shot settings. We further conduct a series of in-depth analyses to demonstrate the merits of leveraging Code-LLMs for IE tasks.
Comparative Evaluation of Traditional and Deep Learning-Based Segmentation Methods for Spoil Pile Delineation Using UAV Images
The stability of mine dumps is contingent upon the precise arrangement of spoil piles, taking into account their geological and geotechnical attributes. Yet, on-site characterisation of individual piles poses a formidable challenge. The utilisation of image-based techniques for spoil pile characterisation, employing remotely acquired data through unmanned aerial systems, is a promising complementary solution. Image processing, such as object-based classification and feature extraction, are dependent upon effective segmentation. This study refines and juxtaposes various segmentation approaches, specifically colour-based and morphology-based techniques. The objective is to enhance and evaluate avenues for object-based analysis for spoil characterisation within the context of mining environments. Furthermore, a comparative analysis is conducted between conventional segmentation approaches and those rooted in deep learning methodologies. Among the diverse segmentation approaches evaluated, the morphology-based deep learning segmentation approach, Segment Anything Model (SAM), exhibited superior performance in comparison to other approaches. This outcome underscores the efficacy of incorporating advanced morphological and deep learning techniques for accurate and efficient spoil pile characterisation. The findings of this study contribute valuable insights to the optimisation of segmentation strategies, thereby advancing the application of image-based techniques for the characterisation of spoil piles in mining environments.
